BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043138
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   226   1e-57
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              226   1e-57
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]   218   5e-55
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   214   8e-54
ref|NP_196468.1| pentatricopeptide repeat-containing protein [Ar...   213   1e-53

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  226 bits (577), Expect = 1e-57
 Identities = 108/149 (72%), Positives = 128/149 (85%)
 Frame = +2

Query: 8   ARKQFDEMERRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKY 187
           ARKQFDEM  RDVP WNS+IAGYA+ G++E ALELFR MP+RNV SWTA+ISGY+QNG+Y
Sbjct: 136 ARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQY 195

Query: 188 DDALAMYLEMEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNA 367
             AL+M+L ME+E  +RPNEVT+ASVLPACANLGALE+G+RIE YA  NGYFKN+YV NA
Sbjct: 196 AKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNA 255

Query: 368 VLEMYSRCGRIDTAMKLFDEIGRRRNLCS 454
           +LEMY+RCGRID A  +F+EI  RRNLCS
Sbjct: 256 LLEMYARCGRIDKAWGVFEEIDGRRNLCS 284



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/132 (24%), Positives = 66/132 (50%)
 Frame = +2

Query: 35  RRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKYDDALAMYLE 214
           R  +     LI    +  ++  A +LF  +P   V  +  +I  YS +G +    ++Y +
Sbjct: 13  RNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQ 72

Query: 215 MEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNAVLEMYSRCG 394
           M  +    PNE +   +  ACA+L + + G+ +  +   +G+  +++   A+++MY++ G
Sbjct: 73  MCLQGC-SPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLG 131

Query: 395 RIDTAMKLFDEI 430
            +  A K FDE+
Sbjct: 132 LLSLARKQFDEM 143


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  226 bits (577), Expect = 1e-57
 Identities = 108/149 (72%), Positives = 128/149 (85%)
 Frame = +2

Query: 8   ARKQFDEMERRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKY 187
           ARKQFDEM  RDVP WNS+IAGYA+ G++E ALELFR MP+RNV SWTA+ISGY+QNG+Y
Sbjct: 136 ARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQY 195

Query: 188 DDALAMYLEMEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNA 367
             AL+M+L ME+E  +RPNEVT+ASVLPACANLGALE+G+RIE YA  NGYFKN+YV NA
Sbjct: 196 AKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNA 255

Query: 368 VLEMYSRCGRIDTAMKLFDEIGRRRNLCS 454
           +LEMY+RCGRID A  +F+EI  RRNLCS
Sbjct: 256 LLEMYARCGRIDKAWGVFEEIDGRRNLCS 284



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/132 (24%), Positives = 66/132 (50%)
 Frame = +2

Query: 35  RRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKYDDALAMYLE 214
           R  +     LI    +  ++  A +LF  +P   V  +  +I  YS +G +    ++Y +
Sbjct: 13  RNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQ 72

Query: 215 MEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNAVLEMYSRCG 394
           M  +    PNE +   +  ACA+L + + G+ +  +   +G+  +++   A+++MY++ G
Sbjct: 73  MCLQGC-SPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLG 131

Query: 395 RIDTAMKLFDEI 430
            +  A K FDE+
Sbjct: 132 LLSLARKQFDEM 143


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score =  218 bits (554), Expect = 5e-55
 Identities = 104/145 (71%), Positives = 124/145 (85%)
 Frame = +2

Query: 8    ARKQFDEMERRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKY 187
            ARKQFDEM  RDVP WNS+IAGYA+ G++E ALELFR MP+RNV SWTA+ISGY+QNG+Y
Sbjct: 621  ARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQY 680

Query: 188  DDALAMYLEMEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNA 367
              AL+M+L ME+E  +RPNEVT+ASVLPACANLGALE+G+RIE YA  NGYFKN+YV NA
Sbjct: 681  AKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNA 740

Query: 368  VLEMYSRCGRIDTAMKLFDEIGRRR 442
            +LEMY+RCGRID A  +F+EI  RR
Sbjct: 741  LLEMYARCGRIDKAWGVFEEIDGRR 765


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  214 bits (544), Expect = 8e-54
 Identities = 99/151 (65%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   FARKQFDEMERRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGK 184
           FA + FDE+  RD+P WN+LIAGY++ G+ME AL++F+ MP RNV+SWTA+ISGYSQNG+
Sbjct: 135 FAHRVFDEIPVRDIPTWNALIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGR 194

Query: 185 YDDALAMYLEMEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCN 364
           Y  AL ++L+MEKE  +RPNEVT+AS+LPACANLGALE+G RIE YA  NG  +N+YV N
Sbjct: 195 YAKALELFLKMEKENGLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSN 254

Query: 365 AVLEMYSRCGRIDTAMKLFDE-IGRRRNLCS 454
           A+LEMY+RCG+ID A K+FD+ IG+RRNLCS
Sbjct: 255 ALLEMYARCGKIDMARKVFDKIIGKRRNLCS 285


>ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g08510 gi|9759345|dbj|BAB10000.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis
           thaliana] gi|332003930|gb|AED91313.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 511

 Score =  213 bits (543), Expect = 1e-53
 Identities = 94/149 (63%), Positives = 123/149 (82%)
 Frame = +2

Query: 8   ARKQFDEMERRDVPAWNSLIAGYAKRGNMEAALELFRAMPSRNVISWTAVISGYSQNGKY 187
           AR+ FDEM +RDVP WN++I GY +RG+M+AA+ELF +MP +NV SWT VISG+SQNG Y
Sbjct: 136 ARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNY 195

Query: 188 DDALAMYLEMEKEELIRPNEVTMASVLPACANLGALEIGQRIEAYASANGYFKNMYVCNA 367
            +AL M+L MEK++ ++PN +T+ SVLPACANLG LEIG+R+E YA  NG+F N+YVCNA
Sbjct: 196 SEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNA 255

Query: 368 VLEMYSRCGRIDTAMKLFDEIGRRRNLCS 454
            +EMYS+CG ID A +LF+E+G +RNLCS
Sbjct: 256 TIEMYSKCGMIDVAKRLFEELGNQRNLCS 284