BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043135
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...   161   6e-38
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   160   1e-37
ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat...   153   1e-35
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar...   144   6e-33

>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/122 (61%), Positives = 90/122 (73%)
 Frame = +3

Query: 3   CFMSPGALGFFVRCLGSQGLVNEANFLFDEVKRLNLCTPNVYSYNCLLEAISKSGDVCLI 182
           C MSPGALGF +RCLG+ GLV EAN LFD+V+++ LC PN YSY CLLE +SKS  + L+
Sbjct: 26  CLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLL 85

Query: 183 ESRLNEMMGFNWVLDKYALTPLLYCYCQAGEFVKAIDVFNRMDDSGWVDSYIFSILVVSF 362
           E RL EM    W  DKY LTP+L  YC   EF KA+DVFN + D GWVD Y+FSILV++F
Sbjct: 86  EMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAF 145

Query: 363 SK 368
           SK
Sbjct: 146 SK 147


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
           gi|449510601|ref|XP_004163711.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g08310,
           mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +3

Query: 3   CFMSPGALGFFVRCLGSQGLVNEANFLFDEVKRLNLCTPNVYSYNCLLEAISKSGDVCLI 182
           C M+P ALG F+RCLGS GLV EAN+LFD+V+ ++LC PN YSYNCLLE +SK+  +  I
Sbjct: 153 CSMTPRALGVFLRCLGSVGLVEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSIDSI 212

Query: 183 ESRLNEMMGFNWVLDKYALTPLLYCYCQAGEFVKAIDVFNRMDDSGWVDSYIFSILVVSF 362
           E+RL EM  F W +DKY LTP+L  YC AG+F KA+ VFN M + GWVD Y+FSIL ++F
Sbjct: 213 ENRLMEMKDFGWEVDKYTLTPVLMAYCNAGKFDKALIVFNDMHERGWVDGYVFSILALAF 272

Query: 363 SK 368
           SK
Sbjct: 273 SK 274


>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
           gi|296085293|emb|CBI29025.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/122 (61%), Positives = 90/122 (73%)
 Frame = +3

Query: 3   CFMSPGALGFFVRCLGSQGLVNEANFLFDEVKRLNLCTPNVYSYNCLLEAISKSGDVCLI 182
           C MSPGALGFF+RCLGS GLV EAN LFD+VK + LC PN YS+NCLLEAISKSG + L+
Sbjct: 159 CAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLV 218

Query: 183 ESRLNEMMGFNWVLDKYALTPLLYCYCQAGEFVKAIDVFNRMDDSGWVDSYIFSILVVSF 362
           E RL EM    W  DKY LT +L  YC + +F KA+ VFN +   GWVD ++ SILV++F
Sbjct: 219 EMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTF 278

Query: 363 SK 368
           SK
Sbjct: 279 SK 280


>ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Glycine max]
          Length = 942

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/122 (58%), Positives = 88/122 (72%)
 Frame = +3

Query: 3   CFMSPGALGFFVRCLGSQGLVNEANFLFDEVKRLNLCTPNVYSYNCLLEAISKSGDVCLI 182
           C  +PGALGF +RCLG  GL  EA+ LFDE++   LC PN Y YNCLLEA+SKSG+V LI
Sbjct: 133 CSFTPGALGFLIRCLGHAGLAREAHHLFDEMRLKGLCVPNDYCYNCLLEALSKSGEVDLI 192

Query: 183 ESRLNEMMGFNWVLDKYALTPLLYCYCQAGEFVKAIDVFNRMDDSGWVDSYIFSILVVSF 362
           E+RL EM GF W  DK+ LTPLL  YC A  F +A+ V+N M + GWVD ++ S+L +SF
Sbjct: 193 EARLEEMKGFGWEFDKFTLTPLLQAYCNARRFDEALRVYNVMREKGWVDGHVCSMLALSF 252

Query: 363 SK 368
           SK
Sbjct: 253 SK 254


>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g08310, mitochondrial; Flags: Precursor
           gi|332003898|gb|AED91281.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 832

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/124 (55%), Positives = 89/124 (71%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   CFMSPGALGFFVRCLGSQGLVNEANFLFDEVKRLNLCTPNVYSYNCLLEAISK--SGDVC 176
           CFMSPGA GFF+RCLG+ GLV+EA+ +FD V+ + LC PN Y+YNCLLEAISK  S  V 
Sbjct: 137 CFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVE 196

Query: 177 LIESRLNEMMGFNWVLDKYALTPLLYCYCQAGEFVKAIDVFNRMDDSGWVDSYIFSILVV 356
           L+E+RL EM    +  DK+ LTP+L  YC  G+  +A+ VFN +   GW+D +I +ILVV
Sbjct: 197 LVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVV 256

Query: 357 SFSK 368
           SF K
Sbjct: 257 SFCK 260