BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043124
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_002511573.1| pentatricopeptide repeat-containing protein,...   113   1e-23
emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera]   105   5e-21
emb|CAN78861.1| hypothetical protein VITISV_030328 [Vitis vinifera]    86   2e-15
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...    82   6e-14

>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
           gi|297733984|emb|CBI15231.3| unnamed protein product
           [Vitis vinifera]
          Length = 893

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/121 (54%), Positives = 85/121 (70%)
 Frame = -3

Query: 364 AGCDKNGLFNESWRFFCKMYSSGCEMSEYSYGGVLSACRALMSKGNVYGEQVYGVVMKNG 185
           +GC++N  F +SWR FCKM  SG + ++++YG VLSAC AL S   +YGE VY + +KNG
Sbjct: 120 SGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSP--LYGELVYSLALKNG 177

Query: 184 FSSNEYVKSGMIDLFVKLGRLEQASKVLFDDDELCDNVVFWNTIISGAAKSDHNKVALEM 5
           F SN YV++GMIDLF KL   E A +V    D LC+NVV WN IISGA K+  N VAL++
Sbjct: 178 FFSNGYVRAGMIDLFAKLCSFEDALRVF--QDVLCENVVCWNAIISGAVKNRENWVALDL 235

Query: 4   F 2
           F
Sbjct: 236 F 236


>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 954

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/121 (48%), Positives = 81/121 (66%)
 Frame = -3

Query: 364 AGCDKNGLFNESWRFFCKMYSSGCEMSEYSYGGVLSACRALMSKGNVYGEQVYGVVMKNG 185
           +G ++N LF +SWRFF  M+ SG + ++ +YG VLSAC AL +     GEQVY +  KNG
Sbjct: 124 SGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPN--LGEQVYSLATKNG 181

Query: 184 FSSNEYVKSGMIDLFVKLGRLEQASKVLFDDDELCDNVVFWNTIISGAAKSDHNKVALEM 5
           F SN +V++GMIDL  + GR   A +V +D    C+NVV WN+IISGA KS    +AL++
Sbjct: 182 FYSNGHVRAGMIDLLARNGRFGDALRVFYDVS--CENVVCWNSIISGAVKSGEYWIALDI 239

Query: 4   F 2
           F
Sbjct: 240 F 240


>emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera]
          Length = 325

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/121 (47%), Positives = 77/121 (63%)
 Frame = -3

Query: 364 AGCDKNGLFNESWRFFCKMYSSGCEMSEYSYGGVLSACRALMSKGNVYGEQVYGVVMKNG 185
           +GC++N  F +SWR F +    G + ++++YG VLSAC AL S   +YGE V  + +KNG
Sbjct: 208 SGCNQNFSFEDSWRNFVRCVFLGFDPNQFTYGSVLSACIALESP--LYGELVCSLALKNG 265

Query: 184 FSSNEYVKSGMIDLFVKLGRLEQASKVLFDDDELCDNVVFWNTIISGAAKSDHNKVALEM 5
           F SN YV++ MIDLF KL   E    V    D LC+NVV WN I+S A K+  N VAL++
Sbjct: 266 FFSNGYVQAEMIDLFTKLCSFEDVLWVF--QDVLCENVVCWNAIVSEAVKNKENWVALDL 323

Query: 4   F 2
           F
Sbjct: 324 F 324


>emb|CAN78861.1| hypothetical protein VITISV_030328 [Vitis vinifera]
          Length = 308

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/106 (46%), Positives = 65/106 (61%)
 Frame = -3

Query: 319 FCKMYSSGCEMSEYSYGGVLSACRALMSKGNVYGEQVYGVVMKNGFSSNEYVKSGMIDLF 140
           F +    G + ++++YG VLSAC AL S   +YGE V  + +KNGF SN YV++ MIDLF
Sbjct: 206 FVRCVFLGFDPNQFTYGSVLSACIALESP--LYGELVCSLALKNGFFSNGYVQAEMIDLF 263

Query: 139 VKLGRLEQASKVLFDDDELCDNVVFWNTIISGAAKSDHNKVALEMF 2
            KL   E    V    D LC+N V WN I+S A K+  N VAL++F
Sbjct: 264 TKLCSFEDVLWVF--QDVLCENXVCWNAIVSEAVKNKENWVALDLF 307


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
           gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
           protein; 84160-81473 [Arabidopsis thaliana]
           gi|332197493|gb|AEE35614.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/121 (41%), Positives = 70/121 (57%)
 Frame = -3

Query: 364 AGCDKNGLFNESWRFFCKMYSSGCEMSEYSYGGVLSACRALMSKGNVYGEQVYGVVMKNG 185
           +G  ++ LF ES RFF KM+  G E +E SYG V+SAC AL +   ++ E V    +K G
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAP--LFSELVCCHTIKMG 180

Query: 184 FSSNEYVKSGMIDLFVKLGRLEQASKVLFDDDELCDNVVFWNTIISGAAKSDHNKVALEM 5
           +   E V+S +ID+F K  R E A KV    D L  NV  WNTII+GA ++ +     ++
Sbjct: 181 YFFYEVVESALIDVFSKNLRFEDAYKVF--RDSLSANVYCWNTIIAGALRNQNYGAVFDL 238

Query: 4   F 2
           F
Sbjct: 239 F 239