BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043101
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   186   4e-45
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-40
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...   153   5e-35
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ...   141   2e-31

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score =  186 bits (473), Expect = 4e-45
 Identities = 89/180 (49%), Positives = 124/180 (68%)
 Frame = -2

Query: 560 QSCVRKEREMFLVVVRVIKSLDWKVARHIRFHKAVVEFGLLEGIHAFTILIYNFVCAGMH 381
           +S + ++  +  VVV+V KSL+W+VARHI+F   + ++G    I AF  ++     AGMH
Sbjct: 81  RSRIHRKHVLSPVVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMH 140

Query: 380 TEAFALVRDIVCFYQEAEFDLFGLFPTMLESTNSVSRHSLLADTFIKVFASNALLDNAVY 201
            E +AL+RDIVC+Y +   D F LFP +LES    +R  ++ D  IKVFA+N++L+NAV 
Sbjct: 141 MEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVD 200

Query: 200 AFMYAKNIGVEPSIRSCNFLLKCLAEGSRKECVMSLFSRMKDSGPLPNVYTYSIIMNLYC 21
            F+ AK  G+E S RSCNFLLKCLAE +R+E + SLF  MK +GP PNV+TY+I+MN YC
Sbjct: 201 VFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC 260


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  171 bits (433), Expect = 2e-40
 Identities = 85/173 (49%), Positives = 113/173 (65%)
 Frame = -2

Query: 536 EMFLVVVRVIKSLDWKVARHIRFHKAVVEFGLLEGIHAFTILIYNFVCAGMHTEAFALVR 357
           E+F +V RV KSL W VAR  +F   V   G    I  F I+++ F  AGM  E +AL+R
Sbjct: 157 ELFPLVSRVFKSLSWSVARKKKFGNWVECHGFSHSISCFRIIVHAFALAGMRLEVWALLR 216

Query: 356 DIVCFYQEAEFDLFGLFPTMLESTNSVSRHSLLADTFIKVFASNALLDNAVYAFMYAKNI 177
           DIV F  EA++D F LF   L+S   V R  ++ D  I VFASN++L+NA+  F  AK++
Sbjct: 217 DIVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 176 GVEPSIRSCNFLLKCLAEGSRKECVMSLFSRMKDSGPLPNVYTYSIIMNLYCN 18
           G+EP IR+CNFLLKCL E +R E V  +F  +KD GP PN+YTY+I+MN YC+
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCS 329


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  169 bits (427), Expect = 1e-39
 Identities = 85/175 (48%), Positives = 118/175 (67%)
 Frame = -2

Query: 545 KEREMFLVVVRVIKSLDWKVARHIRFHKAVVEFGLLEGIHAFTILIYNFVCAGMHTEAFA 366
           K  E+  +VV ++K+L+W+VAR ++F K+V  +G    I+AF  +++ F  AG+  EA  
Sbjct: 22  KRCELSRLVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFALAGLQREAQY 81

Query: 365 LVRDIVCFYQEAEFDLFGLFPTMLESTNSVSRHSLLADTFIKVFASNALLDNAVYAFMYA 186
           L+ DIV +Y+E   ++ GLF T L+S   V R + +    IKVFASN +L +A   FM A
Sbjct: 82  LLTDIVFYYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQA 141

Query: 185 KNIGVEPSIRSCNFLLKCLAEGSRKECVMSLFSRMKDSGPLPNVYTYSIIMNLYC 21
           K IGVE +I SCNFLLKCLAEG + E V SLF  +K+SGP PNVYTY+I++N YC
Sbjct: 142 KKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYC 196


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score =  153 bits (386), Expect = 5e-35
 Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
 Frame = -2

Query: 581 FLSRNRIQSCVRKEREMFLVVVRVIKSLDWKVARHIRFHKAVVEFGLLEGIHAFTILIYN 402
           F    +  SC RK R +F  V+ V K+L+WK+A H  F KAV   G    I+AF I+I+ 
Sbjct: 72  FEKARKPNSCPRK-RGLFPFVLTVFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHV 130

Query: 401 FVCAGMHTEAFALVRDIVCFYQEAEFDLFGLFPTMLESTNSVSRHS--LLADTFIKVFAS 228
              AG+  E    +RDI+ +Y+E   D+  LF T+L+S          ++A+  IKVFA 
Sbjct: 131 LASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAE 190

Query: 227 NALLDNAVYAFMYAKNIGVEPSIRSCNFLLKCLAEGSRKECVMSLFSRMKDSGPLPNVYT 48
           N +L +A   F+ A+  G+E +I SCNFLL C AE ++ E + SLF  +KDSGP PNV+T
Sbjct: 191 NNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFT 250

Query: 47  YSIIMNLYC 21
           Y+I+MN YC
Sbjct: 251 YTIMMNYYC 259


>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514181|gb|AES95804.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  141 bits (356), Expect = 2e-31
 Identities = 74/168 (44%), Positives = 109/168 (64%)
 Frame = -2

Query: 524 VVVRVIKSLDWKVARHIRFHKAVVEFGLLEGIHAFTILIYNFVCAGMHTEAFALVRDIVC 345
           +V +V K+L+W VAR I+F   V   G    I++F+I+I+ +  AGM  E F L+RDIV 
Sbjct: 54  LVSKVFKTLNWGVAREIKFKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDIVT 113

Query: 344 FYQEAEFDLFGLFPTMLESTNSVSRHSLLADTFIKVFASNALLDNAVYAFMYAKNIGVEP 165
           FY+E   D   L   +L+    V + +++ D  IKVFASN++L++A Y F+ AK+ G+E 
Sbjct: 114 FYKEENRDAGELVSLLLD----VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIEL 169

Query: 164 SIRSCNFLLKCLAEGSRKECVMSLFSRMKDSGPLPNVYTYSIIMNLYC 21
           +I SCNFLLKCL E +R + V  LF  +   GP PN++TY+I+MN +C
Sbjct: 170 NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC 217