BLASTX nr result

ID: Lithospermum22_contig00043098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043098
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|2...    47   6e-06
gb|ABK95609.1| unknown [Populus trichocarpa]                           47   6e-06

>ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|222871310|gb|EEF08441.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = +2

Query: 95  SKTSASSFPNGGSSVGGGMQLQQQSTTKQRRCWSPYLHSHFI 220
           S++ +++ PN  S++  G Q QQQS+ K RRCWSP LH  F+
Sbjct: 249 SRSVSTTAPNSESNLRNGPQSQQQSSRKHRRCWSPELHRQFV 290



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 234 QKYRLHVRRTPSVSGTVP 287
           QKYRLH RR P  + + P
Sbjct: 326 QKYRLHTRRVPPATASAP 343


>gb|ABK95609.1| unknown [Populus trichocarpa]
          Length = 221

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = +2

Query: 95  SKTSASSFPNGGSSVGGGMQLQQQSTTKQRRCWSPYLHSHFI 220
           S++ +++ PN  S++  G Q QQQS+ K RRCWSP LH  F+
Sbjct: 50  SRSVSTTAPNSESNLRNGPQSQQQSSRKHRRCWSPELHRQFV 91



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 234 QKYRLHVRRTPSVSGTVP 287
           QKYRLH RR P  + + P
Sbjct: 127 QKYRLHTRRVPPATASAP 144


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