BLASTX nr result

ID: Lithospermum22_contig00043065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043065
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515509.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002880680.1| predicted protein [Arabidopsis lyrata subsp....    69   4e-10
gb|AAL32983.1| SYNC1 protein [Arabidopsis thaliana] gi|110742435...    69   4e-10
ref|NP_565596.1| uncharacterized protein [Arabidopsis thaliana] ...    69   4e-10
emb|CBI21047.3| unnamed protein product [Vitis vinifera]               69   5e-10

>ref|XP_002515509.1| conserved hypothetical protein [Ricinus communis]
           gi|223545453|gb|EEF46958.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 600

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 461 DEFENICCFTXXXXXXXIKNSFESPSWIVSFSILYGDEKAEQKGKLMVAGKVSVDIAEVA 282
           +EFEN+C F         KN F S  W VSF ILYG++ A+ K KL+  G VS++IAE+A
Sbjct: 96  EEFENVCSFLMGSEDN--KNCFRS--WHVSFKILYGED-AKAKTKLVEMGTVSLNIAELA 150

Query: 281 SKM-EAQVERKLPVKFHIGGFAREAILIVQLSFDEIR 174
           S M ++++E+KLPV   I   A +A L V +SF ++R
Sbjct: 151 SSMIDSEIEKKLPVSLKIDEVAVQATLSVCISFAQVR 187


>ref|XP_002880680.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326519|gb|EFH56939.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = -1

Query: 461 DEFENICCFTXXXXXXXIKNSFESPSWIVSFSILYGDEKAEQKGKLMVAGKVSVDIAEVA 282
           +EFE +CC                  W +SF++ YG E  + K K  + GK S+D++E+A
Sbjct: 81  EEFERVCCIVGP--------------WNLSFNVFYG-ENMDAKNKKSLIGKASLDLSELA 125

Query: 281 SKMEAQVERKLPVKFHIGGFAREAILIVQLSFDEIREVGAESRLVGATTADK--PQAIGG 108
           SK E+ VERKLP++      ++EA L+V ++F E+R    +   +G  + D   P+ +  
Sbjct: 126 SKQESTVERKLPIRSKGSVLSKEATLLVNVTFSEVRTEPDDFMQLGQVSIDSAIPKKMST 185

Query: 107 STR 99
           S R
Sbjct: 186 SRR 188


>gb|AAL32983.1| SYNC1 protein [Arabidopsis thaliana] gi|110742435|dbj|BAE99136.1|
           SYNC1 protein [Arabidopsis thaliana]
          Length = 423

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/111 (33%), Positives = 60/111 (54%)
 Frame = -1

Query: 461 DEFENICCFTXXXXXXXIKNSFESPSWIVSFSILYGDEKAEQKGKLMVAGKVSVDIAEVA 282
           +EFE +CC                  W +SF++ YG E  + K K  + GK S+D++E+A
Sbjct: 81  EEFERVCCIVGP--------------WNLSFNVFYG-ENMDAKNKKSLIGKASLDLSELA 125

Query: 281 SKMEAQVERKLPVKFHIGGFAREAILIVQLSFDEIREVGAESRLVGATTAD 129
           SK E+ VERKLP++      ++EA L+V ++F E+R    +   +G  + D
Sbjct: 126 SKQESTVERKLPIRSKGSVLSKEATLVVNVTFSEVRTEPDDFMQLGQISVD 176


>ref|NP_565596.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197747|gb|AAD20705.2| expressed protein
           [Arabidopsis thaliana] gi|330252610|gb|AEC07704.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 423

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/111 (33%), Positives = 60/111 (54%)
 Frame = -1

Query: 461 DEFENICCFTXXXXXXXIKNSFESPSWIVSFSILYGDEKAEQKGKLMVAGKVSVDIAEVA 282
           +EFE +CC                  W +SF++ YG E  + K K  + GK S+D++E+A
Sbjct: 81  EEFERVCCIVGP--------------WNLSFNVFYG-ENMDAKNKKSLIGKASLDLSELA 125

Query: 281 SKMEAQVERKLPVKFHIGGFAREAILIVQLSFDEIREVGAESRLVGATTAD 129
           SK E+ VERKLP++      ++EA L+V ++F E+R    +   +G  + D
Sbjct: 126 SKQESTVERKLPIRSKGSVLSKEATLVVNVTFSEVRTEPDDFMQLGQISVD 176


>emb|CBI21047.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/76 (47%), Positives = 52/76 (68%)
 Frame = -1

Query: 377 VSFSILYGDEKAEQKGKLMVAGKVSVDIAEVASKMEAQVERKLPVKFHIGGFAREAILIV 198
           VSFSIL+G+ + E K K +V GKVS+++AE+ASKME  ++ KLP+   + G A EA L V
Sbjct: 102 VSFSILHGEGR-ELKAKSVVLGKVSLNLAELASKMETDIQTKLPISLQVAGIAMEATLSV 160

Query: 197 QLSFDEIREVGAESRL 150
            +SF E+R     ++L
Sbjct: 161 SVSFMELRNAQDSTQL 176


Top