BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043038
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...    95   5e-18
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]    84   2e-14
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_002869806.1| pentatricopeptide repeat-containing protein ...    80   2e-13

>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/119 (43%), Positives = 72/119 (60%)
 Frame = -1

Query: 357 LESLLTKSLQINHAKQIHALILTNAFRHLQPQLLQLILKTHPYNVQTTTHYIKNIIKYSD 178
           L +L+ K   + HAKQIHA I+TN   HL+P  +  IL     N +T ++YI +I+ +  
Sbjct: 6   LTTLMKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHL- 64

Query: 177 NNLDTFSITSTIRFFSKNNNFKHSIKLYAQLHYLGLVPSSFAISSALKCCAKVLDDGVG 1
            N D+FS    IRFFS+   F  ++ LY Q+  +GL PSS A+SS LK CA+V DD  G
Sbjct: 65  RNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCG 123


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/110 (40%), Positives = 67/110 (60%)
 Frame = -1

Query: 348 LLTKSLQINHAKQIHALILTNAFRHLQPQLLQLILKTHPYNVQTTTHYIKNIIKYSDNNL 169
           L T SL +  AKQ+HALIL +   HL+P L + IL +      T   Y+ +++ +S +  
Sbjct: 10  LSTISLSVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKSP- 68

Query: 168 DTFSITSTIRFFSKNNNFKHSIKLYAQLHYLGLVPSSFAISSALKCCAKV 19
           D+FS    IRF +++  FK +  LY Q+   GL P++FA+SSALK CA++
Sbjct: 69  DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARI 118


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/113 (38%), Positives = 68/113 (60%)
 Frame = -1

Query: 357 LESLLTKSLQINHAKQIHALILTNAFRHLQPQLLQLILKTHPYNVQTTTHYIKNIIKYSD 178
           +  L T SL +  AKQ+HALIL +   HL+P L + IL +      T   Y+ +++ +S 
Sbjct: 3   ISKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHSK 62

Query: 177 NNLDTFSITSTIRFFSKNNNFKHSIKLYAQLHYLGLVPSSFAISSALKCCAKV 19
           +  D+FS    IRF +++  FK +  LY Q+   GL P++FA+SSALK CA++
Sbjct: 63  SP-DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARI 114


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/110 (40%), Positives = 67/110 (60%)
 Frame = -1

Query: 348 LLTKSLQINHAKQIHALILTNAFRHLQPQLLQLILKTHPYNVQTTTHYIKNIIKYSDNNL 169
           L T SL +  AKQ+HALIL +   HL+P L + IL +      T   Y+ +++ +S +  
Sbjct: 10  LSTISLSVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSP- 68

Query: 168 DTFSITSTIRFFSKNNNFKHSIKLYAQLHYLGLVPSSFAISSALKCCAKV 19
           D+FS    IRF +++  FK +  LY Q+   GL P++FA+SSALK CA++
Sbjct: 69  DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARI 118


>ref|XP_002869806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315642|gb|EFH46065.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 852

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = -1

Query: 357 LESLLTKSLQINHAKQIHALILTNAFRHLQPQLLQLILKTHPYNVQTTTHYIKNIIK--Y 184
           L   L + + I  AKQ+HA ++ N + HL+P L+   L       +   +Y+K I+    
Sbjct: 264 LRFFLERCVVIQQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNVVNYVKRILHGFK 323

Query: 183 SDNNLDTFSITSTIRFFSKNNNFKHSIKLYAQLHYLGLVPSSFAISSALKCCAKVLD 13
           S   +D+FS    +RF S++  FK ++ +Y ++HY G+ PSS AI+S L+ C K+ D
Sbjct: 324 SSKGMDSFSWGCLVRFLSQHRKFKETVGVYIEMHYSGIPPSSHAITSVLRACGKMED 380