BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043011
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    79   5e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    78   7e-13
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    77   1e-12
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    77   2e-12
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    74   1e-11

>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/95 (36%), Positives = 59/95 (62%)
 Frame = +3

Query: 12  AHPLWIVLQRRFDVGSETCKQHLKAALAECKQLPGITIGDYFGKLQPLWDELVTYDPIPS 191
           A  LW  +++RF V +    Q +KA LA CKQ  G+T+  Y+GKL  +WD + +Y P+  
Sbjct: 109 ARDLWEQIRKRFSVSNGPKNQKMKADLATCKQ-EGMTVEGYYGKLNKIWDNINSYRPLRI 167

Query: 192 CLCGFCLCDLGEKFQWKQDNDRLHEFLCRIHVDRF 296
           C CG C+C+LG   +  +++D +H++L  ++  +F
Sbjct: 168 CKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKF 202


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/97 (37%), Positives = 57/97 (58%)
 Frame = +3

Query: 9   EAHPLWIVLQRRFDVGSETCKQHLKAALAECKQLPGITIGDYFGKLQPLWDELVTYDPIP 188
           +AH LW  L++RF VG++     +KA LA C+Q  G  + DY+G+L  LW+E   Y PI 
Sbjct: 114 DAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQ-DGQPVIDYYGRLCKLWEEFQIYKPIT 172

Query: 189 SCLCGFCLCDLGEKFQWKQDNDRLHEFLCRIHVDRFG 299
            C CG C C    +   +++ +++H+F+  +   RFG
Sbjct: 173 VCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/93 (39%), Positives = 56/93 (60%)
 Frame = +3

Query: 21  LWIVLQRRFDVGSETCKQHLKAALAECKQLPGITIGDYFGKLQPLWDELVTYDPIPSCLC 200
           LW  ++++F +G+    Q LK+ L  CKQ  G  I  Y+GKL+ LWDEL  YD IP C C
Sbjct: 63  LWEEIKQQFSIGNGPRVQQLKSYLVNCKQ-EGQGIIVYYGKLKSLWDELNNYDSIPVCTC 121

Query: 201 GFCLCDLGEKFQWKQDNDRLHEFLCRIHVDRFG 299
             C C +  + + K++ +R+H+FL  +  D +G
Sbjct: 122 TRCKCKITTQLEKKREEERVHQFLMGLDEDGYG 154


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/97 (36%), Positives = 56/97 (57%)
 Frame = +3

Query: 9   EAHPLWIVLQRRFDVGSETCKQHLKAALAECKQLPGITIGDYFGKLQPLWDELVTYDPIP 188
           +AH LW  L++RF VG++     +K  LA C+Q  G  + DY+G+L  LW+E   Y PI 
Sbjct: 114 DAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQ-DGQPVIDYYGRLCKLWEEFQIYKPIT 172

Query: 189 SCLCGFCLCDLGEKFQWKQDNDRLHEFLCRIHVDRFG 299
            C CG C C    +   +++ +++H+F+  +   RFG
Sbjct: 173 VCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/97 (32%), Positives = 57/97 (58%)
 Frame = +3

Query: 9   EAHPLWIVLQRRFDVGSETCKQHLKAALAECKQLPGITIGDYFGKLQPLWDELVTYDPIP 188
           +AH LW  L++RF VG++     ++A L+ C+Q  G  + +Y+G+L  LW+E   Y P+ 
Sbjct: 119 DAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCRQ-DGQAVIEYYGRLSNLWEEYNIYKPVT 177

Query: 189 SCLCGFCLCDLGEKFQWKQDNDRLHEFLCRIHVDRFG 299
            C CG C C    +   +++ +++H+F+  +   RFG
Sbjct: 178 VCTCGLCRCGATSEPTKEREEEKIHQFVLGLDESRFG 214