BLASTX nr result
ID: Lithospermum22_contig00042952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00042952
(556 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 70 4e-26
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 64 3e-21
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 6e-21
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi... 62 1e-20
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 61 1e-20
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 69.7 bits (169), Expect(4) = 4e-26
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = +2
Query: 272 EGERGIHWKSWDKLCDNKFERVLGFKDLENMNLVLLSKQGWQILTRQASLLFKLLKGKYF 451
EG +GIHW+ W LC +K + LGF+DL N LL KQGW+++ SL+ ++LK KYF
Sbjct: 1118 EGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYF 1177
Query: 452 P 454
P
Sbjct: 1178 P 1178
Score = 42.7 bits (99), Expect(4) = 4e-26
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +1
Query: 121 KGKMLSQSLKEVMIKSVTSAILIFVMNCFKLPVGIIDTLNSSMA 252
+GK+LS++ KEV+IK+V AI + M+ F+LP G D +N +A
Sbjct: 1068 EGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVA 1111
Score = 40.4 bits (93), Expect(4) = 4e-26
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 453 PRSSFLDTKLGTNHSFRWRSLLEGREVLLKGVCW 554
P F++ +LG++ S+ WRS L GRE+L KGV W
Sbjct: 1178 PWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRW 1211
Score = 30.0 bits (66), Expect(4) = 4e-26
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 27 KYLGLPSHIGR*KREVFCFFQEKFDNQLKEWEGE 128
+YLGLP+ G+ K+++F ++ N++ WEG+
Sbjct: 1037 RYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGK 1070
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 63.5 bits (153), Expect(3) = 3e-21
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 263 GNNEGERGIHWKSWDKLCDNKFERVLGFKDLENMNLVLLSKQGWQILTRQASLLFKLLKG 442
G E R IHW SW +LC +K +GF+ L++ N LL+KQ W++ R SL+ ++ K
Sbjct: 77 GQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKA 136
Query: 443 KYFP 454
+YFP
Sbjct: 137 RYFP 140
Score = 43.9 bits (102), Expect(3) = 3e-21
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 GKRGRCSVFFKRNSTINSRNG-KGKMLSQSLKEVMIKSVTSAILIFVMNCFKLPVGIIDT 234
G R + F + + NG K K LS + +EV+IKSV AI ++M+CF+LP G+
Sbjct: 7 GHSKRAVLGFVKERVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXE 66
Query: 235 LNSSMAN 255
+ S + N
Sbjct: 67 IESMVCN 73
Score = 39.3 bits (90), Expect(3) = 3e-21
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 453 PRSSFLDTKLGTNHSFRWRSLLEGREVLLKGVCW 554
P++SFLD +G+N SF WRS++ R +L G+ W
Sbjct: 140 PQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRW 173
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 62.0 bits (149), Expect(4) = 6e-21
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 263 GNNEGERGIHWKSWDKLCDNKFERVLGFKDLENMNLVLLSKQGWQILTRQASLLFKLLKG 442
G+++ +R IHWK+WD LC K +GF+DL N LL +Q W+++ SLL +++K
Sbjct: 832 GSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKA 891
Query: 443 KYF 451
KY+
Sbjct: 892 KYY 894
Score = 42.7 bits (99), Expect(4) = 6e-21
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +1
Query: 121 KGKMLSQSLKEVMIKSVTSAILIFVMNCFKLPVGIIDTLNSSMA 252
K K+LS++ KE+++KSV AI ++M +KLP II ++S+MA
Sbjct: 784 KEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMA 827
Score = 32.3 bits (72), Expect(4) = 6e-21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 465 FLDTKLGTNHSFRWRSLLEGREVLLKGVCW 554
FLD LG + S+ WRS+ + +L +G+ W
Sbjct: 899 FLDAPLGVSTSYSWRSIWSSKALLKEGMVW 928
Score = 28.1 bits (61), Expect(4) = 6e-21
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 3 IREVADQGKYLGLPSHIGR*KREVFCFFQEKFDNQLKEWE 122
+++V KYLG+PS GR + +F ++ +L+ W+
Sbjct: 745 MKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWK 784
>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
Length = 1860
Score = 62.0 bits (149), Expect(4) = 1e-20
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +2
Query: 263 GNNEGERGIHWKSWDKLCDNKFERVLGFKDLENMNLVLLSKQGWQILTRQASLLFKLLKG 442
G +G++ +HW+SW+ + K +GF+DL N +L++QGW+I+T SL ++LKG
Sbjct: 1602 GFEDGKKKMHWRSWEWMTTPKSLGGMGFRDLGLFNQAMLARQGWRIVTDLVSLCARVLKG 1661
Query: 443 KYFP 454
+YFP
Sbjct: 1662 RYFP 1665
Score = 39.3 bits (90), Expect(4) = 1e-20
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 103 INSRNGKGKMLSQSLKEVMIKSVTSAILIFVMNCFKLPVGIIDTLNS 243
+NS N + +S++ KE M+K+V AI +VM+CFKLPV + + S
Sbjct: 1550 VNSWNDRP--MSRAGKETMLKAVAQAIPTYVMSCFKLPVSTCEKMKS 1594
Score = 35.8 bits (81), Expect(4) = 1e-20
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 438 RGNTSPRSSFLDTKLGTNHSFRWRSLLEGREVLLKGVCW 554
+G P S + T SF WRS+L GR++L KGV W
Sbjct: 1660 KGRYFPNSDLWNAPKPTATSFTWRSILFGRDLLRKGVRW 1698
Score = 27.3 bits (59), Expect(4) = 1e-20
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 21 QGKYLGLPSHIGR*KREVFCFFQEKFDNQLKEW 119
Q YLG+P+ IGR F F E+ ++ W
Sbjct: 1521 QDTYLGMPTEIGRASTGSFHFLPERVWRRVNSW 1553
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 61.2 bits (147), Expect(4) = 1e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +2
Query: 281 RGIHWKSWDKLCDNKFERVLGFKDLENMNLVLLSKQGWQILTRQASLLFKLLKGKYF 451
R IHW+SW++LC K LGF+D+++ N LL+KQ W++L LL +LLK +YF
Sbjct: 797 RKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYF 853
Score = 45.8 bits (107), Expect(4) = 1e-20
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 127 KMLSQSLKEVMIKSVTSAILIFVMNCFKLPVGIIDTLNSSMAN 255
+ LSQ KEV++KSV A+ +F M+CFKLP+ + L S+MA+
Sbjct: 745 RCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMAS 787
Score = 35.0 bits (79), Expect(4) = 1e-20
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 459 SSFLDTKLGTNHSFRWRSLLEGREVLLKGV 548
+ FLD L SF WRS+L GRE+L KG+
Sbjct: 856 TDFLDAALSQRPSFGWRSILFGRELLSKGL 885
Score = 22.3 bits (46), Expect(4) = 1e-20
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 24 GKYLGLPSHIGR*KREVFCFFQEKFDNQLKEW 119
G YLGLP K ++ + +++ +L W
Sbjct: 711 GTYLGLPECFSGSKVDMLHYLKDRLKEKLDVW 742