BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042946
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   115   3e-24
ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   100   1e-19
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   100   1e-19

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/106 (54%), Positives = 71/106 (66%)
 Frame = +3

Query: 6    FLYKDLFHNLCREENAESAVNILKKMLSIGYEFDPAAFMPVIDALGKGGHKHEADELSER 185
            F Y DL   LC++E  E+A +IL KM+  GY FDPA+FMPVID LGK G KH+ADEL+ER
Sbjct: 738  FQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAER 797

Query: 186  MLEMASEGXXXXXXXXXXXXXXXGSKNKDSTSDWKSIIHRDDGSTL 323
            M++MASEG                 +NK S SDW++IIHRDDGS L
Sbjct: 798  MMDMASEGMVENKITRNESAFNRQKRNKFSGSDWQTIIHRDDGSGL 843


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/104 (51%), Positives = 71/104 (68%)
 Frame = +3

Query: 6    FLYKDLFHNLCREENAESAVNILKKMLSIGYEFDPAAFMPVIDALGKGGHKHEADELSER 185
            FLYKDL   LC++E  E+A ++L +++  GY+FDPA+FMPVID  GK G+KH ADEL+ER
Sbjct: 734  FLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAER 793

Query: 186  MLEMASEGXXXXXXXXXXXXXXXGSKNKDSTSDWKSIIHRDDGS 317
            M+EMASE                 +KNKD+ +DW  I+HRDDGS
Sbjct: 794  MMEMASESNKENKAYPNVKGHILRNKNKDAGNDWPIIVHRDDGS 837


>ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|222837780|gb|EEE76145.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/100 (54%), Positives = 69/100 (69%)
 Frame = +3

Query: 6   FLYKDLFHNLCREENAESAVNILKKMLSIGYEFDPAAFMPVIDALGKGGHKHEADELSER 185
           FLYKDL  +LC++E  + A  IL K++  GY FDPA+FMPVID LGK G+KHEADEL+E+
Sbjct: 643 FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEK 702

Query: 186 MLEMASEGXXXXXXXXXXXXXXXGSKNKDSTSDWKSIIHR 305
           M+EMASEG               G KNKD  S+W++I+HR
Sbjct: 703 MMEMASEGKVKNKVHQNASCSIQGKKNKDGESEWQTILHR 742


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/104 (49%), Positives = 66/104 (63%)
 Frame = +3

Query: 6    FLYKDLFHNLCREENAESAVNILKKMLSIGYEFDPAAFMPVIDALGKGGHKHEADELSER 185
            FLYKDL  +LC+++  E A  IL KM+  GY FDPAA MPVID LGK G+K EA+  +E+
Sbjct: 734  FLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEK 793

Query: 186  MLEMASEGXXXXXXXXXXXXXXXGSKNKDSTSDWKSIIHRDDGS 317
            M+EMAS G                  NK S ++W++I+HRDDGS
Sbjct: 794  MMEMASVGEVANKVDPNATDIHQKKHNKYSGNNWQNILHRDDGS 837


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/104 (47%), Positives = 66/104 (63%)
 Frame = +3

Query: 6    FLYKDLFHNLCREENAESAVNILKKMLSIGYEFDPAAFMPVIDALGKGGHKHEADELSER 185
            FLYKDL  +LC+++  E A  IL KM+  GY FDPAA MPVID LGK G+K EA+  +++
Sbjct: 734  FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793

Query: 186  MLEMASEGXXXXXXXXXXXXXXXGSKNKDSTSDWKSIIHRDDGS 317
            M+EMAS G                  NK+  ++W++I+HRDDGS
Sbjct: 794  MMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDDGS 837