BLASTX nr result

ID: Lithospermum22_contig00042878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042878
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9...   128   4e-28
emb|CAN62144.1| hypothetical protein VITISV_007841 [Vitis vinifera]   128   4e-28
ref|XP_002329108.1| white-brown-complex ABC transporter family [...   127   1e-27
ref|XP_002316916.1| white-brown-complex ABC transporter family [...   125   3e-27
ref|XP_002533914.1| ATP-binding cassette transporter, putative [...   118   4e-25

>ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9-like [Vitis vinifera]
          Length = 623

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/99 (62%), Positives = 75/99 (75%)
 Frame = -3

Query: 299 GAVVMSLKSATVLGSVIMLGFLLVGGFYVQHVPAFIAWLKYLSVSWYTFKLALGSQYKHG 120
           GA VM  KSAT+LGSVIML FLL GG+YVQ+VP FIAW+KY+S+S YT+KL LGSQYK G
Sbjct: 505 GAAVMDQKSATILGSVIMLSFLLAGGYYVQNVPHFIAWIKYVSISHYTYKLLLGSQYKPG 564

Query: 119 QTYPCGNGKICLVEDFPSINQIGLGDQGIAFVALLLMVV 3
             YPC     CLV DFP++  +GL  Q +A VAL +M+V
Sbjct: 565 DIYPCSAKTTCLVGDFPAVQLVGLDKQILAAVALAIMLV 603


>emb|CAN62144.1| hypothetical protein VITISV_007841 [Vitis vinifera]
          Length = 603

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/99 (62%), Positives = 75/99 (75%)
 Frame = -3

Query: 299 GAVVMSLKSATVLGSVIMLGFLLVGGFYVQHVPAFIAWLKYLSVSWYTFKLALGSQYKHG 120
           GA VM  KSAT+LGSVIML FLL GG+YVQ+VP FIAW+KY+S+S YT+KL LGSQYK G
Sbjct: 485 GAAVMDQKSATILGSVIMLSFLLAGGYYVQNVPHFIAWIKYVSISHYTYKLLLGSQYKPG 544

Query: 119 QTYPCGNGKICLVEDFPSINQIGLGDQGIAFVALLLMVV 3
             YPC     CLV DFP++  +GL  Q +A VAL +M+V
Sbjct: 545 DIYPCSAKTTCLVGDFPAVQLVGLDKQILAAVALAIMLV 583


>ref|XP_002329108.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222869777|gb|EEF06908.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 GAVVMSLKSATVLGSVIMLGFLLVGGFYVQHVPAFIAWLKYLSVSWYTFKLALGSQYKHG 120
           GA+V++ +SAT+ GSVIML FLL GG+YV HVPAFI+W+KY+S+S YT+KL LGSQYK  
Sbjct: 502 GALVLNQRSATITGSVIMLSFLLAGGYYVTHVPAFISWVKYISISQYTYKLLLGSQYKPS 561

Query: 119 QTYPCGN-GKICLVEDFPSINQIGLGDQGIAFVALLLMVV 3
            TY CG  G +CLV D+P+I ++GL DQ +  VAL +M+V
Sbjct: 562 DTYTCGGAGGVCLVGDYPAIKKVGLDDQVLGAVALGIMLV 601


>ref|XP_002316916.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859981|gb|EEE97528.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/101 (59%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
 Frame = -3

Query: 299 GAVVMSLKSATVLGSVIMLGFLLVGGFYVQHVPAFIAWLKYLSVSWYTFKLALGSQYKHG 120
           GA+V++ KSAT++GSVIML FLL GG+YV HVPAFI+W+KY+S+S YT+KL LGSQ+K  
Sbjct: 502 GALVLNQKSATIMGSVIMLSFLLAGGYYVTHVPAFISWVKYISISQYTYKLLLGSQFKPT 561

Query: 119 QTYPCGN-GKICLVEDFPSINQIGLGDQ--GIAFVALLLMV 6
            TYPCG  G +CLV D+P+I Q+GL  Q  G A + ++L+V
Sbjct: 562 DTYPCGGAGGVCLVGDYPAIKQVGLDGQVLGAAVLGIMLVV 602


>ref|XP_002533914.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223526124|gb|EEF28469.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 632

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 4/103 (3%)
 Frame = -3

Query: 299 GAVVMSLKSATVLGSVIMLGFLLVGGFYVQHVPAFIAWLKYLSVSWYTFKLALGSQYKHG 120
           GA+V+  +SAT +GSV+ML F LV G+YVQ+VP FI W+KY+S+S YT++L LGSQYK  
Sbjct: 512 GAIVLDQRSATTVGSVLMLSFQLVSGYYVQNVPIFIGWIKYISISQYTYRLLLGSQYKQT 571

Query: 119 QTYPCGN--GKICLVEDFPSINQIGLGDQG--IAFVALLLMVV 3
            TYPC      +CLV D+P+I  +GLG  G  IA VALL+M+V
Sbjct: 572 DTYPCNTTASGVCLVGDYPAIKMVGLGVDGQIIAAVALLIMLV 614


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