BLASTX nr result

ID: Lithospermum22_contig00042867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042867
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   124   8e-27
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,...   119   3e-25
gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japo...    89   5e-16
ref|NP_001173982.1| Os04g0475800 [Oryza sativa Japonica Group] g...    69   4e-10

>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/102 (54%), Positives = 72/102 (70%)
 Frame = -2

Query: 306 IDAVIYNMYLQSLCCQNRSTEAFSLVKRMERIGLTPTNVSYNIILKGLLMEKDLDEVLEF 127
           +D  +YN+Y   LC +N+S EA SL++ M   GL PTNVSYN IL G   E  +DE L+ 
Sbjct: 288 VDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQL 347

Query: 126 FDRIDWASGGPDNFSFNTILSVACKQGNSAMVQRIMNRMEYE 1
           FD  +WA+  PD  SFNTILS ACKQGNS+M++R++ RMEYE
Sbjct: 348 FDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYE 389


>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/102 (54%), Positives = 72/102 (70%)
 Frame = -2

Query: 306 IDAVIYNMYLQSLCCQNRSTEAFSLVKRMERIGLTPTNVSYNIILKGLLMEKDLDEVLEF 127
           +D  +YN+Y   LC +N+S EA SL++ M   GL PTNVSYN IL G   E  +DE L+ 
Sbjct: 396 VDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQL 455

Query: 126 FDRIDWASGGPDNFSFNTILSVACKQGNSAMVQRIMNRMEYE 1
           FD  +WA+  PD  SFNTILS ACKQGNS+M++R++ RMEYE
Sbjct: 456 FDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYE 497


>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/101 (55%), Positives = 68/101 (67%)
 Frame = -2

Query: 303 DAVIYNMYLQSLCCQNRSTEAFSLVKRMERIGLTPTNVSYNIILKGLLMEKDLDEVLEFF 124
           D  +YN+YL  LC  NRS EA +++  M   GLTPTNVSYNIIL G   E    + LE  
Sbjct: 288 DVAVYNLYLHCLCLHNRSGEALTVLNSMIEKGLTPTNVSYNIILDGFCRENGAADALELL 347

Query: 123 DRIDWASGGPDNFSFNTILSVACKQGNSAMVQRIMNRMEYE 1
           D   W + GPD  SFNTIL +ACKQGNS M+Q+I++RMEYE
Sbjct: 348 DHFKWGTNGPDVVSFNTILFMACKQGNSVMIQKILHRMEYE 388


>gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japonica Group]
          Length = 545

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/102 (41%), Positives = 61/102 (59%)
 Frame = -2

Query: 306 IDAVIYNMYLQSLCCQNRSTEAFSLVKRMERIGLTPTNVSYNIILKGLLMEKDLDEVLEF 127
           +D + +N+YL SLCC  +  +A +LV  M   GL P+  +YN ILKG  ME DL   L+ 
Sbjct: 400 VDIITWNIYLHSLCCDGQVKKALALVSGMMERGLVPSTTTYNTILKGFCMELDLQGALQM 459

Query: 126 FDRIDWASGGPDNFSFNTILSVACKQGNSAMVQRIMNRMEYE 1
            D         D+ SFNTILS AC+Q N+++++ ++ RM  E
Sbjct: 460 LDHFSSTGVPCDSVSFNTILSAACRQQNASVIRMVLYRMHVE 501


>ref|NP_001173982.1| Os04g0475800 [Oryza sativa Japonica Group]
           gi|255675551|dbj|BAH92710.1| Os04g0475800 [Oryza sativa
           Japonica Group]
          Length = 568

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = -2

Query: 270 LCCQN---RSTEAFSLVKRMERIGLTPTNVSYNIILKGLLMEKDLDEVLEFFDRIDWASG 100
           + CQN      +A +LV  M   GL P+  +YN ILKG  ME DL   L+  D       
Sbjct: 384 MTCQNFIRMVKKALALVSGMMERGLVPSTTTYNTILKGFCMELDLQGALQMLDHFSSTGV 443

Query: 99  GPDNFSFNTILSVACKQGNSAMVQRIMNRMEYE 1
             D+ SFNTILS AC+Q N+++++ ++ RM  E
Sbjct: 444 PCDSVSFNTILSAACRQQNASVIRMVLYRMHVE 476


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