BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042856
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   3e-15
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          57   4e-14
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-12
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   3e-12
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    49   4e-12

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 56.6 bits (135), Expect(2) = 3e-15
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = -3

Query: 142  RVPPRVKTFLWKVLHNILPTNTKLRRRGVMVEDLCPLCQEAPETLEH 2
            ++PP+VK F WK +HN L   T +R+RG+ ++  CP C E  ET EH
Sbjct: 1058 KIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEH 1104



 Score = 49.7 bits (117), Expect(2) = 3e-15
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = -2

Query: 377  IWKDPWVPRQTDFYVRG----ERREGPRCVSQLIKNGAWDAALVMTLLGEEDANRVLSIP 210
            IW DPWVP    + +         +GP+ V +LI N  W+  L+ TL    ++  +  IP
Sbjct: 943  IWGDPWVPSLERYSIAATEGVSEDDGPQKVCELISNDRWNVELLNTLFQPWESTAIQRIP 1002

Query: 209  LGRQQFRDRLVWNHTKSGTYLTSCA 135
            +  Q+  D+ +W  +K+G +    A
Sbjct: 1003 VALQKKPDQWMWMMSKNGQFTVRSA 1027


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 57.0 bits (136), Expect(2) = 4e-14
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -3

Query: 145 LRVPPRVKTFLWKVLHNILPTNTKLRRRGVMVEDLCPLCQEAPETLEH 2
           LR PPR+KT LW+++ N L   T L RRG+ V+++CP C    ET  H
Sbjct: 287 LRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAH 334



 Score = 45.4 bits (106), Expect(2) = 4e-14
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
 Frame = -2

Query: 374 WKDPWVPRQ-----------TDFYVRGERREGPRCVSQLIKNGAWDAALVMTLLGEEDAN 228
           W DPW+P             +D Y           VS  I+NG W+  L+     EED  
Sbjct: 175 WSDPWIPGSDTGLPKYHSPGSDLYTH---------VSDFIQNGGWNENLLRLCFEEEDVT 225

Query: 227 RVLSIPLGRQQFRDRLVWNHTKSGTY 150
           R+L I L  ++  D + W   K G Y
Sbjct: 226 RILQIRLSLRRPLDMVRWKFIKDGEY 251


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 56.2 bits (134), Expect(2) = 3e-12
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -2

Query: 383  LDIWKDPWVPRQTDFYVRGERREGPRCVSQL--IKNGAWDAALVMTLLGEEDANRVLSIP 210
            +DIW  PWV  +   +++  R EG   V  L  ++   W+  L+     E D   +L+IP
Sbjct: 939  IDIWSAPWVGDEEGRFIKSARVEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIP 998

Query: 209  LGRQQFRDRLVWNHTKSGTYLTSCA 135
            L  +  +D L W ++K GTY    A
Sbjct: 999  LSTRCLQDELTWAYSKDGTYSVKTA 1023



 Score = 40.0 bits (92), Expect(2) = 3e-12
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -3

Query: 145  LRVPPRVKTFLWKVLHNILPTNTKLRRRGVMVEDLCPLCQEAPETLEH 2
            L V P+V+ FLW+   + LP    L+RR ++ E  CP C    ET  H
Sbjct: 1045 LNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFH 1092


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 54.7 bits (130), Expect(2) = 3e-12
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = -2

Query: 377  IWKDPWVPRQTDFYVRGERREGPRCVSQLIK--NGAWDAALVMTLLGEEDANRVLSIPLG 204
            IW+DPWV  +   ++  E+      VS+LI      W  +L+ T+  E D   +LSIPL 
Sbjct: 938  IWEDPWVLDELGRFITSEKHGNLNMVSELIDFDRMEWKVSLIETVFNERDIKCILSIPLS 997

Query: 203  RQQFRDRLVWNHTKSGTYLTSCA 135
                +D L W  TK+  Y    A
Sbjct: 998  SLPLKDELTWAFTKNAHYSVKTA 1020



 Score = 41.6 bits (96), Expect(2) = 3e-12
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = -3

Query: 145  LRVPPRVKTFLWKVLHNILPTNTKLRRRGVMVEDLCPLCQEAPETLEH 2
            + V P+VK FLW++  N LP  + L+ R ++ +DLCP     PE+  H
Sbjct: 1042 MEVSPKVKHFLWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFH 1089


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 48.9 bits (115), Expect(2) = 4e-12
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
 Frame = -2

Query: 383 LDIWKDPWVPRQTDFYVRGER-REGPRCVSQLIK--NGAWDAALVMTLLGEEDANRVLSI 213
           ++IW+D  +P  ++  V   R R     V +LI   +G WD  L+ TL    DANR+L I
Sbjct: 749 VNIWEDSLIPSSSNGKVLTPRGRNIITKVEELINPVSGGWDEDLIDTLFWPIDANRILQI 808

Query: 212 PL--GRQQFRDRLVWNHTKSGTY 150
           P+  GR+ F   + W+HT+SG +
Sbjct: 809 PISAGREDF---VAWHHTRSGIF 828



 Score = 47.0 bits (110), Expect(2) = 4e-12
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -3

Query: 145  LRVPPRVKTFLWKVLHNILPTNTKLRRRGVMVEDLCPLCQEAPETLEH 2
            L +PP++K F W++LH ++P    L  + + V+  CP+C    E ++H
Sbjct: 866  LEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKH 913