BLASTX nr result

ID: Lithospermum22_contig00042793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042793
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   166   2e-39
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]        144   1e-32
gb|ACN85298.1| EMB2261 putative [Oryza coarctata]                     142   2e-32

>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/114 (71%), Positives = 92/114 (80%)
 Frame = -1

Query: 352 EHYSCMVDLLGRACEIEEAENLIRTSKFHDDPSLWITLLGACTTNTKPAVAERIAKKTME 173
           EHYSCMVDLLGRA  +EEAE LI TS F DD SLW  LLGACTT T   +AERIAK+ ME
Sbjct: 498 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME 557

Query: 172 LKPDYHLSYVLLSNVYRANGRWNDAVGIWKLMRDRGVKKMPGKSWIGGDESIGS 11
           L+PDYHLSYVLL+NVY+A GRWNDA+ I +LM+DRGV KMPGKSWI    ++GS
Sbjct: 558 LEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGS 611


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/114 (71%), Positives = 92/114 (80%)
 Frame = -1

Query: 352 EHYSCMVDLLGRACEIEEAENLIRTSKFHDDPSLWITLLGACTTNTKPAVAERIAKKTME 173
           EHYSCMVDLLGRA  +EEAE LI TS F DD SLW  LLGACTT T   +AERIAK+ ME
Sbjct: 557 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME 616

Query: 172 LKPDYHLSYVLLSNVYRANGRWNDAVGIWKLMRDRGVKKMPGKSWIGGDESIGS 11
           L+PDYHLSYVLL+NVY+A GRWNDA+ I +LM+DRGV KMPGKSWI    ++GS
Sbjct: 617 LEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGS 670


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/106 (66%), Positives = 81/106 (76%)
 Frame = -1

Query: 352 EHYSCMVDLLGRACEIEEAENLIRTSKFHDDPSLWITLLGACTTNTKPAVAERIAKKTME 173
           EHY+CM+DLLGRA  +EEAENLI  +   D+PSLW  LLGAC  +   A AERIAKK +E
Sbjct: 499 EHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVE 558

Query: 172 LKPDYHLSYVLLSNVYRANGRWNDAVGIWKLMRDRGVKKMPGKSWI 35
           LKPD+HLSYV L+NVYRA GRW+DAV I  LM  RGV KMPG SWI
Sbjct: 559 LKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWI 604


>gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]
          Length = 630

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/111 (61%), Positives = 81/111 (72%)
 Frame = -1

Query: 352 EHYSCMVDLLGRACEIEEAENLIRTSKFHDDPSLWITLLGACTTNTKPAVAERIAKKTME 173
           EHY+C+VDLL R   +EEAE+L+  S+F DD SLW  +LGAC T+T P VA R+AKK ME
Sbjct: 485 EHYNCIVDLLSRVELLEEAEDLVNKSQFRDDSSLWAAILGACATHTNPDVAVRVAKKMME 544

Query: 172 LKPDYHLSYVLLSNVYRANGRWNDAVGIWKLMRDRGVKKMPGKSWIGGDES 20
           L+P YHLSYVLL NVYR  G W DAV + KLM+ R VKK PG SWI  + S
Sbjct: 545 LEPQYHLSYVLLENVYRTIGHWEDAVKVRKLMKSRKVKKEPGTSWINANRS 595


>gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
          Length = 621

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/111 (63%), Positives = 81/111 (72%)
 Frame = -1

Query: 352 EHYSCMVDLLGRACEIEEAENLIRTSKFHDDPSLWITLLGACTTNTKPAVAERIAKKTME 173
           EHY+CMVDLL R   +EEAE+LI  S F DD SLW  +LGA  T++ P VAER+AKKTME
Sbjct: 475 EHYNCMVDLLSRVELLEEAEDLINKSPFRDDSSLWAAILGASATHSNPDVAERVAKKTME 534

Query: 172 LKPDYHLSYVLLSNVYRANGRWNDAVGIWKLMRDRGVKKMPGKSWIGGDES 20
           L+P YHLSYVLL NVYR  GRW DA+ I  LM+ R VKK PG SWI  + S
Sbjct: 535 LEPQYHLSYVLLENVYRTVGRWEDALDIRSLMKSRKVKKEPGMSWIDVNRS 585


Top