BLASTX nr result

ID: Lithospermum22_contig00042728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042728
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29

>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/103 (73%), Positives = 87/103 (84%)
 Frame = +3

Query: 3   FVAGDDTHPQSNEIAQTWDELLQLMKSKGYEPNTDVVLLDVEESEKEKFLYRHSEKLALV 182
           FVAGDDTHPQ+ EI QTW++LLQ MK KGY PNT VVLLD+EE +KEKFLYRHSEKLA+V
Sbjct: 497 FVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVV 556

Query: 183 SGLINTSEGETVRIMKNLRVCEDCHAAFKVISEIVDREIIVRD 311
            GLI T+ G  +RIMKNLRVCEDCHAA K+IS +  REI+VRD
Sbjct: 557 FGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRD 599


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/103 (71%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   FVAGDDTHPQSNEIAQTWDELLQLMKSKGYEPNTDVVLLDVEESEKEKFLYRHSEKLALV 182
           FVAGD THPQ+ +I + WD+LL  MK +GY P T VVLLD+EE EKEKFLYRHSEKLA+V
Sbjct: 394 FVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVV 453

Query: 183 SGLINTSEGETVRIMKNLRVCEDCHAAFKVISEIVDREIIVRD 311
            GL+ T EG  +RIMKNLRVCEDCHAA K+IS IV REIIVRD
Sbjct: 454 FGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGIVSREIIVRD 496


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/103 (66%), Positives = 85/103 (82%)
 Frame = +3

Query: 3   FVAGDDTHPQSNEIAQTWDELLQLMKSKGYEPNTDVVLLDVEESEKEKFLYRHSEKLALV 182
           FVAG+++HP + +I Q W+ELL+ M+ KGY PNT VVLLD+EE EK KF+ RHSEKLALV
Sbjct: 479 FVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALV 538

Query: 183 SGLINTSEGETVRIMKNLRVCEDCHAAFKVISEIVDREIIVRD 311
            GL+NT     +RIMKNLR+CEDCH+AFK+IS IV+REI+VRD
Sbjct: 539 FGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRD 581


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/103 (66%), Positives = 85/103 (82%)
 Frame = +3

Query: 3   FVAGDDTHPQSNEIAQTWDELLQLMKSKGYEPNTDVVLLDVEESEKEKFLYRHSEKLALV 182
           FVAG+++HP + +I Q W+ELL+ M+ KGY PNT VVLLD+EE EK KF+ RHSEKLALV
Sbjct: 512 FVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALV 571

Query: 183 SGLINTSEGETVRIMKNLRVCEDCHAAFKVISEIVDREIIVRD 311
            GL+NT     +RIMKNLR+CEDCH+AFK+IS IV+REI+VRD
Sbjct: 572 FGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRD 614


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/87 (72%), Positives = 73/87 (83%)
 Frame = +3

Query: 51  TWDELLQLMKSKGYEPNTDVVLLDVEESEKEKFLYRHSEKLALVSGLINTSEGETVRIMK 230
           TW++LLQ MK KGY PNT VVLLD+EE +KEKFLYRHSEKLA+V GLI T+ G  +RIMK
Sbjct: 479 TWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMK 538

Query: 231 NLRVCEDCHAAFKVISEIVDREIIVRD 311
           NLRVCEDCHAA K+IS +  REI+VRD
Sbjct: 539 NLRVCEDCHAALKIISVVSTREIVVRD 565


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