BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042718
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    79   5e-13
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    76   3e-12
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    74   2e-11
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    74   2e-11
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    73   2e-11

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +1

Query: 1    EDEKGIHWK*WXXXXXXXXXXXXXXXXXXCMNLALLTKQGWRVMTRQASLLFKILKGXXX 180
            E  KGIHW+ W                    N ALL KQGWR+M    SL+ ++LK    
Sbjct: 1118 EGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYF 1177

Query: 181  XXXXXXXXXXXX-PSFGWRNILEGRKVFAKGTRWRVGDGRSIDMWKEPWVPRSTNF 345
                         PS+ WR+ L GR++  KG RWR+GDG+ + ++ +PWVP   +F
Sbjct: 1178 PWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPSF 1233


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 94  NLALLTKQGWRVMTRQASLLFKILKGXXXXXXXXXXXXXXX-PSFGWRNILEGRKVFAKG 270
           NLA+L KQGW ++T+  SL+ ++LK                 PSF W+ I   R +  KG
Sbjct: 383 NLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFLSARLGHNPSFTWKGIWSSRAILLKG 442

Query: 271 TRWRVGDGRSIDMWKEPWVPRSTNF 345
           +RWR+GDG SID+W  PW+  + NF
Sbjct: 443 SRWRIGDGCSIDVWNNPWLRDAENF 467


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1    EDEKGIHWK*WXXXXXXXXXXXXXXXXXXCMNLALLTKQGWRVMTRQASLLFKILKGXXX 180
            + +K +HWK W                    N A+L +Q WR++T   SL  ++LKG   
Sbjct: 846  DGKKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYF 905

Query: 181  XXXXXXXXXXXX-PSFGWRNILEGRKVFAKGTRWRVGDGRSIDMWKEPWVP 330
                         PSF WR++L GR++ AKG RW VGDG++I ++ + W+P
Sbjct: 906  PNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 956


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1    EDEKGIHWK*WXXXXXXXXXXXXXXXXXXCMNLALLTKQGWRVMTRQASLLFKILKGXXX 180
            + +K +HWK W                    N A+L +Q WR++T   SL  ++LKG   
Sbjct: 803  DGKKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYF 862

Query: 181  XXXXXXXXXXXX-PSFGWRNILEGRKVFAKGTRWRVGDGRSIDMWKEPWVP 330
                         PSF WR++L GR++ AKG RW VGDG++I ++ + W+P
Sbjct: 863  PNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 913


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
 Frame = +1

Query: 4   DEKGIHWK*WXXXXXXXXXXXXXXXXXXCMNLALLTKQGWRVMTRQASLLFKILKGXXXX 183
           D + IHW+ W                    NLALL KQ WR+++   SL  ++L+     
Sbjct: 296 DHRRIHWQEWWKMCMPKGKGGMGFRDLQSFNLALLAKQVWRLLSDPDSLCARVLRARYYR 355

Query: 184 XXXXXXXXXXX-PSFGWRNILEGRKVFAKGTRWRVGDGRSIDMWKEPWVPRSTNFYLRGS 360
                        S+ W++IL G + F +G  WRVGDG  I +W++ W+P S N  ++ +
Sbjct: 356 DGKLLNARMKSGSSYTWQSILAGLQCFKQGYIWRVGDGTQIKIWEDNWIPGSHNMKIQTN 415

Query: 361 DGENI 375
            G N+
Sbjct: 416 RGNNL 420