BLASTX nr result

ID: Lithospermum22_contig00042717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042717
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   139   3e-31
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   128   4e-28
ref|XP_002873092.1| zinc finger family protein [Arabidopsis lyra...   125   5e-27

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/161 (49%), Positives = 108/161 (67%), Gaps = 2/161 (1%)
 Frame = +1

Query: 4   KASGKCPQCNSKCMLKDVRLLYASQIVVVDEELQKKVRHLESRCATLEKEGAEWRKKEHQ 183
           ++SGKCPQC  KC L++VR LYAS++V VDE+L+KK+R LE++CA+LEK+ A+W  KE  
Sbjct: 147 RSSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWCMKESD 206

Query: 184 WHRTETDLRMQVNQLRERTRYIEDLSGNSQVRPS--TSFSGPHLVSKIDGQKFLHNFGLQ 357
           WH+ E DL +QV QL ERT Y+E LS     R S   +  G +       +    NF LQ
Sbjct: 207 WHKREADLHLQVQQLIERTTYLERLSSEMHGRGSGLVAARGHNFAENFGRRGSSCNFVLQ 266

Query: 358 GDLNIEGARLFDIDAVSHCIIVARRVSLMGGAQVLTKISLL 480
            +L ++GAR FDIDA    +++ARR+S  GG  VLTK+SL+
Sbjct: 267 KELQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMSLI 307


>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 10/166 (6%)
 Frame = +1

Query: 16  KCPQCNSKCMLKDVRLLYASQIVVVDEELQKKVRHLESRCATLEKEGAEWRKKEHQWHRT 195
           KCPQCN K  L+D+R L+  +I VVDEE QK++R LE +CA+L K+  +  KKE +W R 
Sbjct: 215 KCPQCNRKGTLRDIRKLFVPRIAVVDEESQKRIRFLEEKCASLVKKDVDLCKKESEWKRR 274

Query: 196 ETDLRMQVNQLRERTRYIEDLSGNSQVRPS---TSFSGPH-------LVSKIDGQKFLHN 345
           E  L+++V + +ERT Y+E L G+ Q RPS   T++ G         + S  + Q     
Sbjct: 275 EAALQLEVQKCKERTIYLEHLLGDLQSRPSGVATAYRGSQGHEFGNSIYSDFNRQGSSSC 334

Query: 346 FGLQGDLNIEGARLFDIDAVSHCIIVARRVSLMGGAQVLTKISLLP 483
           F LQ +L ++GARLFD+DA    +++ RRV +MGG+ VLTK+SL+P
Sbjct: 335 FMLQRELRVDGARLFDVDASGKILLLVRRVPMMGGSHVLTKMSLIP 380


>ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
           gi|449482586|ref|XP_004156335.1| PREDICTED: E3
           ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
          Length = 617

 Score =  139 bits (349), Expect = 3e-31
 Identities = 75/170 (44%), Positives = 107/170 (62%), Gaps = 10/170 (5%)
 Frame = +1

Query: 1   RKASGKCPQCNSKCMLKDVRLLYASQIVVVDEELQKKVRHLESRCATLEKEGAEWRKKEH 180
           RK +GKCPQCN KC  KDVR ++A +IV  D E QK+++ LE+ CA+LEK+ A W KKE 
Sbjct: 148 RKNAGKCPQCNRKCSTKDVRKIFAPRIVAADGESQKRIKSLEATCASLEKKEANWCKKEV 207

Query: 181 QWHRTETDLRMQVNQLRERTRYIEDLSGNSQVRP----------STSFSGPHLVSKIDGQ 330
           +W + ETD++ ++ +L ERT Y+E L  +SQ +P            S S  +   +  GQ
Sbjct: 208 EWKKRETDMQSKLRELSERTNYLEHLLEDSQRKPVLANLDCTFQGKSVSEHNFGLRFSGQ 267

Query: 331 KFLHNFGLQGDLNIEGARLFDIDAVSHCIIVARRVSLMGGAQVLTKISLL 480
               +F L+ +L ++GARL D+DA +  ++VARR    GG  VLTKISL+
Sbjct: 268 VSSCSFILKKELLVDGARLIDVDASNQIVLVARRG--FGGTHVLTKISLM 315


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/159 (41%), Positives = 92/159 (57%)
 Frame = +1

Query: 4   KASGKCPQCNSKCMLKDVRLLYASQIVVVDEELQKKVRHLESRCATLEKEGAEWRKKEHQ 183
           ++SGKCPQC  KC L++VR LYAS++V VDE+L+KK+R LE++CA+LEK+ A+W  KE  
Sbjct: 147 RSSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWCMKESD 206

Query: 184 WHRTETDLRMQVNQLRERTRYIEDLSGNSQVRPSTSFSGPHLVSKIDGQKFLHNFGLQGD 363
           WH+ E DL +QV QL E+                                         +
Sbjct: 207 WHKREADLHLQVQQLIEK-----------------------------------------E 225

Query: 364 LNIEGARLFDIDAVSHCIIVARRVSLMGGAQVLTKISLL 480
           L ++GAR FDIDA    +++ARR+S  GG  VLTK+SL+
Sbjct: 226 LQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMSLI 264


>ref|XP_002873092.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318929|gb|EFH49351.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/164 (37%), Positives = 104/164 (63%), Gaps = 5/164 (3%)
 Frame = +1

Query: 1   RKASGKCPQCNSKCMLKDVRLLYASQIVVVDEELQKKVRHLESRCATLEKEGAEWRKKEH 180
           R++ GKCP CN  C L+DVR +YAS++  VD+E  K++  LE++ +++E++ A W  KE 
Sbjct: 149 RRSGGKCPLCNKTCSLRDVRKIYASRVAAVDDEAHKRIVFLEAKLSSIEQKTASWSNKEA 208

Query: 181 QWHRTETDLRMQVNQLRERTRYIEDLSGNSQVRPSTS-----FSGPHLVSKIDGQKFLHN 345
           QW + E +LR++VN+L+++   +E  +  +Q + + +      SG ++  +  GQ    +
Sbjct: 209 QWKKIEAELRLEVNKLKKKIANMESTTKGAQSQSNAASQEKYISGHNIYQEHHGQSPYCS 268

Query: 346 FGLQGDLNIEGARLFDIDAVSHCIIVARRVSLMGGAQVLTKISL 477
           F  QG+L I G R+FDID     +++ARR+  +GG  VLT++SL
Sbjct: 269 FRHQGELLINGGRIFDIDGGRQILLLARRLPGVGGTFVLTQMSL 312


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