BLASTX nr result

ID: Lithospermum22_contig00042692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042692
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   6e-08
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    61   1e-07
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...    61   1e-07
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t...    61   1e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-07

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = -3

Query: 250 AKNIPNDYNKLCDAESDFYISKARIRWIRDGNASTRLFHTTMRIHHNKNLITMMQNDDGE 71
           AK+I ND       E      K+RI W++ G+ +++LF T ++  H  N I M+  +DG 
Sbjct: 326 AKSIMNDLRHWSHIEDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGR 385

Query: 70  MIEDYGEVKDITVGFYKQLFSKR 2
           +I+D  EV++  + FYK+L   R
Sbjct: 386 VIQDADEVQEEILEFYKKLLGTR 408


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -3

Query: 229 YNKLCDAESDFYISKARIRWIRDGNASTRLFHTTMRIHHNKNLITMMQNDDGEMIEDYGE 50
           +N    A   FY  K+RI+W++DG+A+TR FH  +  +  KNLI  ++ DD   +E+  +
Sbjct: 360 WNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQ 419

Query: 49  VKDITVGFYKQL 14
           VK++ V +Y  L
Sbjct: 420 VKEMIVAYYTHL 431


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -3

Query: 229 YNKLCDAESDFYISKARIRWIRDGNASTRLFHTTMRIHHNKNLITMMQNDDGEMIEDYGE 50
           +N    A   FY  K+RI+W++DG+A+TR FH  +  +  KNLI  ++ DD   +E+  +
Sbjct: 360 WNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQ 419

Query: 49  VKDITVGFYKQL 14
           VK++ V +Y  L
Sbjct: 420 VKEMIVAYYTHL 431


>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
           gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
           protein [Arabidopsis thaliana]
          Length = 626

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -3

Query: 229 YNKLCDAESDFYISKARIRWIRDGNASTRLFHTTMRIHHNKNLITMMQNDDGEMIEDYGE 50
           +N    A   FY  K+RI+W++DG+A+TR FH  +  +  KNLI  ++ DD   +E+  +
Sbjct: 424 WNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQ 483

Query: 49  VKDITVGFYKQL 14
           VK++ V +Y  L
Sbjct: 484 VKEMIVAYYTHL 495


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/70 (41%), Positives = 45/70 (64%)
 Frame = -3

Query: 214 DAESDFYISKARIRWIRDGNASTRLFHTTMRIHHNKNLITMMQNDDGEMIEDYGEVKDIT 35
           D E   +  K+R+  I DG+ +TR FH +  I  ++N I M+QN+DGE I +  EVK + 
Sbjct: 336 DDEETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDGEWISNPMEVKAMV 395

Query: 34  VGFYKQLFSK 5
           +G++K LFS+
Sbjct: 396 LGYWKHLFSE 405


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