BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042670
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   128   6e-28
ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana] gi|1...   125   4e-27
ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana] g...   125   4e-27
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
           DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/100 (62%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   TIKGGTHVDHIANQIGKHFADKL--STKKLTITPNNVKNQLWVFVNALIDNPAFDSQTKE 176
           TIKGGTHVD++ANQI  H    +    K   I  + VKN LW+FVNALIDNPAFDSQTKE
Sbjct: 312 TIKGGTHVDYVANQIANHIMGAVIKKNKNANIKAHAVKNHLWMFVNALIDNPAFDSQTKE 371

Query: 177 TLTLRQSSFGTNCELSPAFLKNIENKTDVKDRLLTWVDFK 296
           TLTLRQSSFG+ CEL P FLK +E    + + LL+W DFK
Sbjct: 372 TLTLRQSSFGSKCELQPDFLKKVEKNIGIVETLLSWADFK 411


>ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA
           topoisomerase 2; AltName: Full=DNA topoisomerase II
           gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis
           thaliana] gi|9294657|dbj|BAB03006.1| DNA topoisomerase
           II [Arabidopsis thaliana] gi|332643305|gb|AEE76826.1|
           DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   TIKGGTHVDHIANQIGKHFADKLS--TKKLTITPNNVKNQLWVFVNALIDNPAFDSQTKE 176
           TIKGGTHVD++ +QI  H    ++   K   +  +NVKN LWVFVNALIDNPAFDSQTKE
Sbjct: 322 TIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 381

Query: 177 TLTLRQSSFGTNCELSPAFLKNIENKTDVKDRLLTWVDFKQ 299
           TLTLRQSSFG+ CELS  FLK +  K+ V + LL+W DFKQ
Sbjct: 382 TLTLRQSSFGSKCELSEDFLKKV-GKSGVVENLLSWADFKQ 421


>ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|332643306|gb|AEE76827.1| DNA topoisomerase 2
           [Arabidopsis thaliana]
          Length = 1438

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   TIKGGTHVDHIANQIGKHFADKLS--TKKLTITPNNVKNQLWVFVNALIDNPAFDSQTKE 176
           TIKGGTHVD++ +QI  H    ++   K   +  +NVKN LWVFVNALIDNPAFDSQTKE
Sbjct: 322 TIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 381

Query: 177 TLTLRQSSFGTNCELSPAFLKNIENKTDVKDRLLTWVDFKQ 299
           TLTLRQSSFG+ CELS  FLK +  K+ V + LL+W DFKQ
Sbjct: 382 TLTLRQSSFGSKCELSEDFLKKV-GKSGVVENLLSWADFKQ 421


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/101 (61%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   TIKGGTHVDHIANQIGKHFADKLSTK--KLTITPNNVKNQLWVFVNALIDNPAFDSQTKE 176
           TIKGGTHVD++ NQI  +  + ++ K     I  +NVKN LWVFVN LIDNPAFDSQTKE
Sbjct: 298 TIKGGTHVDYVTNQITNYVMNAVNKKHKNSNIKAHNVKNYLWVFVNCLIDNPAFDSQTKE 357

Query: 177 TLTLRQSSFGTNCELSPAFLKNIENKTDVKDRLLTWVDFKQ 299
           TLTLRQSSFG+ CELS  FLK +  K+D+ D LL+W  FK+
Sbjct: 358 TLTLRQSSFGSKCELSEDFLKKVA-KSDIVDNLLSWAKFKE 397


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
           predicted protein [Populus trichocarpa]
          Length = 1482

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/101 (61%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   TIKGGTHVDHIANQIGKHFADKLSTKKLT--ITPNNVKNQLWVFVNALIDNPAFDSQTKE 176
           TIKGGTHVD++ NQI  +  + ++ K     I  +NVKN LWVFVN LIDNPAFDSQTKE
Sbjct: 314 TIKGGTHVDYVTNQITNYVMNAVNKKHKNGNIKAHNVKNYLWVFVNCLIDNPAFDSQTKE 373

Query: 177 TLTLRQSSFGTNCELSPAFLKNIENKTDVKDRLLTWVDFKQ 299
           TLTLRQSSFG+ CELS  FLK +  K+D+ D LL+W  FK+
Sbjct: 374 TLTLRQSSFGSKCELSEDFLKKVA-KSDIVDNLLSWAKFKE 413