BLASTX nr result

ID: Lithospermum22_contig00042632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042632
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19962.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier com...   110   9e-23
ref|XP_002526168.1| Auxin efflux carrier component, putative [Ri...   109   2e-22
ref|XP_002302196.1| auxin efflux carrier component [Populus tric...   109   2e-22
ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lyc...   107   1e-21

>emb|CBI19962.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = +1

Query: 19  NTGDHRKEPISDDVGGKDLSFRDCAKLPAAGEED-KGTKTNQEMPRAIVMLRLILIVVAR 195
           N G   ++   D VG +++SFRD +K P A EED K T T Q+MPR  VMLRLIL +V R
Sbjct: 317 NGGGGERQGCKDVVGEREISFRDSSKFPVAEEEDPKATATGQDMPRTHVMLRLILTMVGR 376

Query: 196 KLSRNPNTYSSIIGLTWSLISFKWNVGMP 282
           KLSRNPNTYSS++GL WSLISFKWNVGMP
Sbjct: 377 KLSRNPNTYSSVLGLLWSLISFKWNVGMP 405


>ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier component 6-like [Vitis
           vinifera]
          Length = 532

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/74 (72%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 64  GKDLSFRDCAKLPAAGEED-KGTKTNQEMPRAIVMLRLILIVVARKLSRNPNTYSSIIGL 240
           GK++SFRD +K P A EED K T T Q+MPR  VMLRLIL +V RKLSRNPNTYSS++GL
Sbjct: 337 GKEISFRDSSKFPVAEEEDPKATATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVLGL 396

Query: 241 TWSLISFKWNVGMP 282
            WSLISFKWNVGMP
Sbjct: 397 LWSLISFKWNVGMP 410


>ref|XP_002526168.1| Auxin efflux carrier component, putative [Ricinus communis]
           gi|223534545|gb|EEF36244.1| Auxin efflux carrier
           component, putative [Ricinus communis]
          Length = 544

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
 Frame = +1

Query: 49  SDDVGGKDLSFRDCAKLPAAGEEDKGTK--TN-QEMPRAIVMLRLILIVVARKLSRNPNT 219
           S D+  K++SFRD +K PAA EE+   K  TN QEMP A+VM+RLILIVV RKLSRNPNT
Sbjct: 363 SKDITEKEISFRDSSKTPAADEEETIAKDATNVQEMPGALVMIRLILIVVGRKLSRNPNT 422

Query: 220 YSSIIGLTWSLISFKWNVGMP 282
           YSS++GL WSLISFKWNVGMP
Sbjct: 423 YSSVLGLLWSLISFKWNVGMP 443


>ref|XP_002302196.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222843922|gb|EEE81469.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 532

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 10/101 (9%)
 Frame = +1

Query: 10  NGENTGDHRKEPISDDV---------GGKDLSFRDCAKLPAAGEED-KGTKTNQEMPRAI 159
           N  NT    + P++  +         G K++SFRD  K+PA  E + K   T+QEMP AI
Sbjct: 310 NATNTPFWARSPVAGKISRHPSPAISGEKEISFRDSCKMPAPEETNSKEAVTSQEMPHAI 369

Query: 160 VMLRLILIVVARKLSRNPNTYSSIIGLTWSLISFKWNVGMP 282
           VMLRLIL+VV RKLSRNPNTYSS++GL WSL+SFKWNVGMP
Sbjct: 370 VMLRLILVVVGRKLSRNPNTYSSVLGLLWSLVSFKWNVGMP 410


>ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lycopersicum]
           gi|327187149|gb|ADR30414.2| auxin efflux facilitator
           SlPIN6 [Solanum lycopersicum]
          Length = 538

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/96 (59%), Positives = 65/96 (67%), Gaps = 5/96 (5%)
 Frame = +1

Query: 10  NGENTGDHRKEPISDDVGGKDLSFRDCAKLPA--AGEEDKGTKTN---QEMPRAIVMLRL 174
           NGE  G        DDVG K++SFRD +  P    G  D     N   QEMP A+VMLRL
Sbjct: 327 NGERQG------YRDDVGEKEISFRDISNFPVQEVGAADSSNTNNIIKQEMPNALVMLRL 380

Query: 175 ILIVVARKLSRNPNTYSSIIGLTWSLISFKWNVGMP 282
           I+++V RKLSRNPNTYSSI+GL WSLISFKWNVGMP
Sbjct: 381 IIVMVGRKLSRNPNTYSSILGLLWSLISFKWNVGMP 416


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