BLASTX nr result

ID: Lithospermum22_contig00042619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042619
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                55   5e-06
emb|CAN80009.1| hypothetical protein VITISV_024812 [Vitis vinifera]    55   6e-06
emb|CAN79655.1| hypothetical protein VITISV_001095 [Vitis vinifera]    55   8e-06

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/100 (30%), Positives = 52/100 (52%)
 Frame = +3

Query: 9   QITITMNDMDIYAKSFPNSLTGLAMDWYIELPSNSIDSYSHTTDAFIVKYNTSITNMQDG 188
           Q+T+   D  ++ K FP SL    + W+ +LP NSI S+      F  +Y TS  +    
Sbjct: 249 QMTLYTTDRTVWCKVFPTSLREGPLGWFSDLPPNSIASFDALELKFTTQYATSRPHRTSS 308

Query: 189 RALMDVQQAPRELVKDFHERYKVILNNIPSIDNKIAYRGL 308
            +L++V+Q   E ++ F  R+  +  NI +++ +IA   L
Sbjct: 309 MSLLNVKQERGESLRTFMNRFSKVCMNIRNLNPEIAMHHL 348


>emb|CAN80009.1| hypothetical protein VITISV_024812 [Vitis vinifera]
          Length = 825

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/80 (30%), Positives = 48/80 (60%)
 Frame = +3

Query: 12  ITITMNDMDIYAKSFPNSLTGLAMDWYIELPSNSIDSYSHTTDAFIVKYNTSITNMQDGR 191
           +T+ + +  +  K FP SL G A+ W+  LPSNS+D++   ++AF+ +Y  S  + Q+  
Sbjct: 44  MTLDIGNDALLCKVFPASLQGQALSWFHRLPSNSVDNFRDLSEAFVEQYLCSTQHKQNIS 103

Query: 192 ALMDVQQAPRELVKDFHERY 251
            L +++    E +++F +R+
Sbjct: 104 TLQNIKMQENESLREFMKRF 123


>emb|CAN79655.1| hypothetical protein VITISV_001095 [Vitis vinifera]
          Length = 455

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = +3

Query: 12  ITITMNDMDIYAKSFPNSLTGLAMDWYIELPSNSIDSYSHTTDAFIVKYNTSITNMQDGR 191
           +T+ + +  +  K FP SL G A+ W+ +LP+NSID++    +AF+ +Y  S  + Q+  
Sbjct: 44  MTLDIGNDRLLCKVFPASLQGQALSWFHQLPANSIDNFRDLFEAFVGQYLCSARHKQNIS 103

Query: 192 ALMDVQQAPRELVKDFHERYKVILNNIPS 278
            L +++    E +++F +R+  ++  + S
Sbjct: 104 TLQNIKMQENETLREFVKRFGQVVLQVES 132


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