BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042477
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    68   9e-10
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    64   2e-08
gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|A...    62   5e-08
ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis ...    62   5e-08
ref|XP_002867435.1| ring-H2 finger protein ATL4J precursor [Arab...    62   6e-08

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/72 (51%), Positives = 47/72 (65%)
 Frame = -2

Query: 301 SKISNSSEKRSMSEIVVHPRFIDFNIIRNSSGTNKEDSSSIYHNSGNVREANMRRLWLPI 122
           S+  + +EKRSMSEI    R+ DF      S  N+   SS+  N  N++E  MRRLWLPI
Sbjct: 346 SRFLHPTEKRSMSEITACSRYADF------STKNRIRESSLAQN--NIKEERMRRLWLPI 397

Query: 121 AKRTVQWFANRE 86
           A+RTV+WFANRE
Sbjct: 398 ARRTVEWFANRE 409


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 45/73 (61%)
 Frame = -2

Query: 298 KISNSSEKRSMSEIVVHPRFIDFNIIRNSSGTNKEDSSSIYHNSGNVREANMRRLWLPIA 119
           K +N  EKRSMSEI    RF D  +         +DSSS+ +N   ++E  MR++W PIA
Sbjct: 348 KYANPGEKRSMSEITAVSRFGDLGMKMRVF----KDSSSLQNN---LKEERMRQIWFPIA 400

Query: 118 KRTVQWFANRERR 80
           +RT QWF NRERR
Sbjct: 401 RRTAQWFVNRERR 413


>gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|AAV43780.1|
           At4g28890 [Arabidopsis thaliana]
          Length = 386

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = -2

Query: 277 KRSMSEIVVHPRFIDFNIIRNSSGTNKEDSSSIYHNSGNVREANMRRLWLPIAKRTVQWF 98
           +RS+S+I   PR +  +I  + SG+  E +S++  N GN  E   RRLWLPIA++T QWF
Sbjct: 311 RRSVSDITAVPR-LSISIHGDCSGSAAETASAL-QNGGNETEERRRRLWLPIARKTAQWF 368

Query: 97  ANRERR 80
           ANRE+R
Sbjct: 369 ANREKR 374


>ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
           gi|68565150|sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL42; AltName: Full=RING-H2
           finger protein ATL42; Flags: Precursor
           gi|4972078|emb|CAB43903.1| putative protein [Arabidopsis
           thaliana] gi|7269744|emb|CAB81477.1| putative protein
           [Arabidopsis thaliana] gi|66865954|gb|AAY57611.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|332660159|gb|AEE85559.1| E3 ubiquitin-protein ligase
           ATL42 [Arabidopsis thaliana]
          Length = 432

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = -2

Query: 277 KRSMSEIVVHPRFIDFNIIRNSSGTNKEDSSSIYHNSGNVREANMRRLWLPIAKRTVQWF 98
           +RS+S+I   PR +  +I  + SG+  E +S++  N GN  E   RRLWLPIA++T QWF
Sbjct: 357 RRSVSDITAVPR-LSISIHGDCSGSAAETASAL-QNGGNETEERRRRLWLPIARKTAQWF 414

Query: 97  ANRERR 80
           ANRE+R
Sbjct: 415 ANREKR 420


>ref|XP_002867435.1| ring-H2 finger protein ATL4J precursor [Arabidopsis lyrata subsp.
           lyrata] gi|297313271|gb|EFH43694.1| ring-H2 finger
           protein ATL4J precursor [Arabidopsis lyrata subsp.
           lyrata]
          Length = 435

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -2

Query: 277 KRSMSEIVVHPRFIDFNIIRNSSGTNKEDSSSIYHNSGNVREANMRRLWLPIAKRTVQWF 98
           +RS+S+I   PR +  ++ R+ SG+    +S++  N GN  E   RRLWLPIA++T QWF
Sbjct: 360 RRSVSDITAVPR-LSISVHRDCSGSAAGTASAL-QNGGNETEERRRRLWLPIARKTAQWF 417

Query: 97  ANRERR 80
           ANRE+R
Sbjct: 418 ANREKR 423