BLASTX nr result

ID: Lithospermum22_contig00042422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042422
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago ...    62   4e-08
emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    59   3e-07
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 390

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +1

Query: 1   SKISSTLRIPLYADGATSDFAGVSYARLYVEIDAKKGMP*FVPLVSEWGEEFRQKVKYEW 180
           S+I S L +PLYAD  TS    VSYAR+ VE+D  + +P  V +    G  F+QK++Y+W
Sbjct: 195 SRIGSVLGVPLYADECTSKGLRVSYARMLVEMDVTQEIPITVAVEDPNGVVFKQKLEYDW 254

Query: 181 VPPICEHCTLFGHD 222
           VP  C+ C + GH+
Sbjct: 255 VPHFCKKCQMVGHN 268


>ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
           gi|355505586|gb|AES86728.1| hypothetical protein
           MTR_4g014190 [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +1

Query: 1   SKISSTLRIPLYADGATSDFAGVSYARLYVEIDAKKGMP*FVPLVSEWGEEFRQKVKYEW 180
           S+I STL  PL+AD  TS  + +SYARL VEID  + +   V + S  G+ F Q++ Y+W
Sbjct: 236 SRIGSTLGNPLFADECTSKQSRISYARLLVEIDVTRPLLYKVMVESPDGKCFEQRIVYDW 295

Query: 181 VPPICEHCTLFGHDLKHFNF-GVNLPRKKGQMVEWI 285
            P  C+ C   GH     +F  V  P+K     +WI
Sbjct: 296 EPSFCKKCQQVGHVCDKQSFQPVERPKK-----DWI 326


>emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 428

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/73 (36%), Positives = 41/73 (56%)
 Frame = +1

Query: 1   SKISSTLRIPLYADGATSDFAGVSYARLYVEIDAKKGMP*FVPLVSEWGEEFRQKVKYEW 180
           S+I ST+ +P+YAD  T+    +S+AR+ +E+D    +   + +    G  F QKV Y W
Sbjct: 228 SRIGSTIGVPIYADECTTKQLRISFARILIEMDVTGKIQEEIKVEDPNGRVFTQKVGYAW 287

Query: 181 VPPICEHCTLFGH 219
           +PP C  C   GH
Sbjct: 288 LPPFCPKCQKIGH 300


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = +1

Query: 1   SKISSTLRIPLYADGATSDFAGVSYARLYVEIDAKKGMP*FVPLVSEWGEEFRQKVKYEW 180
           S+I STL  PL+AD  TS  + +SYARL VEID  + +   V + S  G+ F Q++ Y+W
Sbjct: 375 SRIGSTLGNPLFADECTSKQSRISYARLLVEIDVTRPLLYKVMVESPDGKCFEQRIVYDW 434

Query: 181 VPPICEHCTLFGH 219
            P  C+ C    H
Sbjct: 435 EPSFCKKCQQVDH 447


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   SKISSTLRIPLYADGATSDFAGVSYARLYVEIDAKKGMP*FVPLVSEWGEEFRQKVKYEW 180
           SKI+S +  PL+AD  T+    + +AR+ VE+D  K +P  V +  + G  + QKV+YEW
Sbjct: 145 SKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEW 204

Query: 181 VPPI-CEHCTLFGH 219
            P   C +C   GH
Sbjct: 205 QPTSRCSYCLHLGH 218


Top