BLASTX nr result

ID: Lithospermum22_contig00042417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042417
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1YDH|A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Li...    67   1e-09
ref|NP_196756.2| cytokinin riboside 5'-monophosphate phosphoribo...    67   1e-09
ref|XP_002871507.1| hypothetical protein ARALYDRAFT_488037 [Arab...    67   1e-09
emb|CAB87668.1| lysine decarboxylase-like protein [Arabidopsis t...    67   1e-09
gb|AFO66505.1| putative homodimerization protein [Brassica napus]      65   4e-09

>pdb|1YDH|A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein
           From Arabidopsis Thaliana Gene At5g11950
           gi|60594281|pdb|1YDH|B Chain B, X-Ray Structure Of A
           Lysine Decarboxylase-Like Protein From Arabidopsis
           Thaliana Gene At5g11950 gi|150261491|pdb|2Q4D|A Chain A,
           Ensemble Refinement Of The Crystal Structure Of A Lysine
           Decarboxylase-Like Protein From Arabidopsis Thaliana
           Gene At5g11950 gi|150261492|pdb|2Q4D|B Chain B, Ensemble
           Refinement Of The Crystal Structure Of A Lysine
           Decarboxylase-Like Protein From Arabidopsis Thaliana
           Gene At5g11950
          Length = 216

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +3

Query: 102 KFKKICVFCGSHPGHRKVFGDAAIQLGDELVQRKIDL 212
           +F+KICVFCGSH GHR+VF DAAI+LG+ELV+RKIDL
Sbjct: 8   RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL 44


>ref|NP_196756.2| cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8
           [Arabidopsis thaliana] gi|42573343|ref|NP_974768.1|
           cytokinin riboside 5'-monophosphate phosphoribohydrolase
           LOG8 [Arabidopsis thaliana]
           gi|75147169|sp|Q84MC2.1|LOG8_ARATH RecName:
           Full=Cytokinin riboside 5'-monophosphate
           phosphoribohydrolase LOG8; AltName: Full=LOG family
           protein At5g11950; AltName: Full=Protein LONELY GUY 8
           gi|30102598|gb|AAP21217.1| At5g11950 [Arabidopsis
           thaliana] gi|110743604|dbj|BAE99639.1| lysine
           decarboxylase - like protein [Arabidopsis thaliana]
           gi|332004360|gb|AED91743.1| cytokinin riboside
           5'-monophosphate phosphoribohydrolase LOG8 [Arabidopsis
           thaliana] gi|332004361|gb|AED91744.1| cytokinin riboside
           5'-monophosphate phosphoribohydrolase LOG8 [Arabidopsis
           thaliana]
          Length = 216

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +3

Query: 102 KFKKICVFCGSHPGHRKVFGDAAIQLGDELVQRKIDL 212
           +F+KICVFCGSH GHR+VF DAAI+LG+ELV+RKIDL
Sbjct: 8   RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL 44


>ref|XP_002871507.1| hypothetical protein ARALYDRAFT_488037 [Arabidopsis lyrata subsp.
           lyrata] gi|297317344|gb|EFH47766.1| hypothetical protein
           ARALYDRAFT_488037 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +3

Query: 102 KFKKICVFCGSHPGHRKVFGDAAIQLGDELVQRKIDL 212
           +F+KICVFCGSH GHR+VF DAAI+LG+ELV+RKIDL
Sbjct: 9   RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL 45


>emb|CAB87668.1| lysine decarboxylase-like protein [Arabidopsis thaliana]
          Length = 215

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +3

Query: 102 KFKKICVFCGSHPGHRKVFGDAAIQLGDELVQRKIDL 212
           +F+KICVFCGSH GHR+VF DAAI+LG+ELV+RKIDL
Sbjct: 8   RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL 44


>gb|AFO66505.1| putative homodimerization protein [Brassica napus]
          Length = 216

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/37 (75%), Positives = 35/37 (94%)
 Frame = +3

Query: 102 KFKKICVFCGSHPGHRKVFGDAAIQLGDELVQRKIDL 212
           +FKK+CVFCGSH G+R+VF DAAI+LG+ELV+RKIDL
Sbjct: 8   RFKKVCVFCGSHSGNREVFSDAAIELGNELVKRKIDL 44


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