BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042406
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   174   5e-42
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   163   1e-38
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   150   1e-34

>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/150 (60%), Positives = 114/150 (76%), Gaps = 6/150 (4%)
 Frame = -1

Query: 432 FAPNRRYACSFPRAYSSTIQWISPLQ----TRP-PDRPIEKEDSENYLSRKR-KFMSHES 271
           F   R ++CS P A SS++ WISPLQ    T P PD P  +  +     RK+ KF+SHES
Sbjct: 74  FXEYRCFSCS-PSAPSSSLPWISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHES 132

Query: 270 AINLIKSEKDPLRALAVFNKVSEQRGFNHNNATYGTILYKLAVCKEFHAIDAILHRMTYE 91
           AINLIK E DP RAL +FN+V+EQRGF+HNNATY TIL+KLA  K+F AIDA+LH+MTYE
Sbjct: 133 AINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYE 192

Query: 90  ACEFHEGVFINLMKRFSKFSMHDRVLEMFN 1
            C+FHEG+F+NLMK FSK S+H+RV+EMF+
Sbjct: 193 TCKFHEGIFLNLMKHFSKLSLHERVVEMFD 222


>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/150 (60%), Positives = 114/150 (76%), Gaps = 6/150 (4%)
 Frame = -1

Query: 432 FAPNRRYACSFPRAYSSTIQWISPLQ----TRP-PDRPIEKEDSENYLSRKR-KFMSHES 271
           F   R ++CS P A SS++ WISPLQ    T P PD P  +  +     RK+ KF+SHES
Sbjct: 4   FHEYRCFSCS-PSAPSSSLPWISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHES 62

Query: 270 AINLIKSEKDPLRALAVFNKVSEQRGFNHNNATYGTILYKLAVCKEFHAIDAILHRMTYE 91
           AINLIK E DP RAL +FN+V+EQRGF+HNNATY TIL+KLA  K+F AIDA+LH+MTYE
Sbjct: 63  AINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYE 122

Query: 90  ACEFHEGVFINLMKRFSKFSMHDRVLEMFN 1
            C+FHEG+F+NLMK FSK S+H+RV+EMF+
Sbjct: 123 TCKFHEGIFLNLMKHFSKLSLHERVVEMFD 152


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 5/135 (3%)
 Frame = -1

Query: 393 AYSSTIQWISPLQTRP-----PDRPIEKEDSENYLSRKRKFMSHESAINLIKSEKDPLRA 229
           A S +  WISPLQ        PD P E   +     RK KF+SHESAINLIK EKDP  A
Sbjct: 16  ATSYSFPWISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHESAINLIKREKDPQHA 75

Query: 228 LAVFNKVSEQRGFNHNNATYGTILYKLAVCKEFHAIDAILHRMTYEACEFHEGVFINLMK 49
           L +FN V EQ+GFNHN+ATY T+++KLA  K+FHA+DA+LH+MTYE C+FHE +F+NLMK
Sbjct: 76  LEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMK 135

Query: 48  RFSKFSMHDRVLEMF 4
            F K S+H+RVLEMF
Sbjct: 136 HFYKSSLHERVLEMF 150


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/138 (54%), Positives = 96/138 (69%)
 Frame = -1

Query: 417 RYACSFPRAYSSTIQWISPLQTRPPDRPIEKEDSENYLSRKRKFMSHESAINLIKSEKDP 238
           ++   +   + S + WISPL+    D P E   S     RKRK +SH+SAI+LIK EKDP
Sbjct: 50  KFCAMYRSRHGSWLPWISPLKFTKADPPPEPLPSP---PRKRKHISHDSAIDLIKREKDP 106

Query: 237 LRALAVFNKVSEQRGFNHNNATYGTILYKLAVCKEFHAIDAILHRMTYEACEFHEGVFIN 58
             AL +FN VSEQ GF HNNATY TIL KLA C  FHA+D +LH+MTYE C+FHEG+F+N
Sbjct: 107 QHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVN 166

Query: 57  LMKRFSKFSMHDRVLEMF 4
           LMK FSK S+H+++L  +
Sbjct: 167 LMKHFSKSSLHEKLLHAY 184


>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/148 (51%), Positives = 99/148 (66%), Gaps = 7/148 (4%)
 Frame = -1

Query: 426 PNRRYACSFPRAY----SSTIQWISPLQTRPPDRPIEKEDSENYLS---RKRKFMSHESA 268
           P   + C   + Y    +S++ WISPL    P  P      E  ++   +K K+++H+ A
Sbjct: 77  PKTIHCCRHMQPYRVPSASSLPWISPLNFTKPLEPKLDPPPEIVVAETRKKSKYITHDVA 136

Query: 267 INLIKSEKDPLRALAVFNKVSEQRGFNHNNATYGTILYKLAVCKEFHAIDAILHRMTYEA 88
           INLIK EKDP  AL +FN VSEQ+GFNHNNATY TIL KLA  K+F A+D +LH+MTYEA
Sbjct: 137 INLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEA 196

Query: 87  CEFHEGVFINLMKRFSKFSMHDRVLEMF 4
           C+FHEGVFINLMK +SK   H++V + F
Sbjct: 197 CKFHEGVFINLMKHYSKCGFHEKVFDAF 224