BLASTX nr result

ID: Lithospermum22_contig00042374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042374
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
emb|CBI27247.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002512033.1| pentatricopeptide repeat-containing protein,...   192   3e-47
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...   181   6e-44

>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 324

 Score =  202 bits (514), Expect = 2e-50
 Identities = 92/133 (69%), Positives = 113/133 (84%)
 Frame = +2

Query: 5   TWTALICGAAQHGFGKEALLLFDRMVESGVNPNELTFTGILSACAQAGLLEEGRKHFNMI 184
           +WTALICG+AQHG+GKEAL +F+ M + GV PNE+TFTGILSACAQAGL+EEGRK+FN I
Sbjct: 143 SWTALICGSAQHGYGKEALSMFELMQDMGVKPNEMTFTGILSACAQAGLVEEGRKYFNKI 202

Query: 185 EAYCLRPRIQHYGCMVDLLGKAGLVVEAFEVIKTMPMEPNVVIWGSFLLSCKLHKQFDLA 364
           E Y L PRIQH+GCMVDL GKAGL+ EA+E+I +M +EPNVV+W SFL SCK+HKQF+LA
Sbjct: 203 EEYGLEPRIQHFGCMVDLFGKAGLLEEAYEIINSMKLEPNVVLWSSFLSSCKVHKQFELA 262

Query: 365 ERFIERIMSVVTP 403
           ER  E+++  V P
Sbjct: 263 ERVTEQVLRTVKP 275


>emb|CBI27247.3| unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  202 bits (514), Expect = 2e-50
 Identities = 92/133 (69%), Positives = 113/133 (84%)
 Frame = +2

Query: 5   TWTALICGAAQHGFGKEALLLFDRMVESGVNPNELTFTGILSACAQAGLLEEGRKHFNMI 184
           +WTALICG+AQHG+GKEAL +F+ M + GV PNE+TFTGILSACAQAGL+EEGRK+FN I
Sbjct: 87  SWTALICGSAQHGYGKEALSMFELMQDMGVKPNEMTFTGILSACAQAGLVEEGRKYFNKI 146

Query: 185 EAYCLRPRIQHYGCMVDLLGKAGLVVEAFEVIKTMPMEPNVVIWGSFLLSCKLHKQFDLA 364
           E Y L PRIQH+GCMVDL GKAGL+ EA+E+I +M +EPNVV+W SFL SCK+HKQF+LA
Sbjct: 147 EEYGLEPRIQHFGCMVDLFGKAGLLEEAYEIINSMKLEPNVVLWSSFLSSCKVHKQFELA 206

Query: 365 ERFIERIMSVVTP 403
           ER  E+++  V P
Sbjct: 207 ERVTEQVLRTVKP 219


>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/133 (66%), Positives = 109/133 (81%)
 Frame = +2

Query: 5   TWTALICGAAQHGFGKEALLLFDRMVESGVNPNELTFTGILSACAQAGLLEEGRKHFNMI 184
           TWTALICGAAQHGF +E L LF  M E+GV PNE+TFTGIL+ACA+ GL+EEGRK+F MI
Sbjct: 255 TWTALICGAAQHGFCQEVLSLFKMMQEAGVRPNEMTFTGILNACARKGLIEEGRKYFKMI 314

Query: 185 EAYCLRPRIQHYGCMVDLLGKAGLVVEAFEVIKTMPMEPNVVIWGSFLLSCKLHKQFDLA 364
           +   L PRIQHYGCMVD+ GKAGL+ EA+EVIK M  EPN+VIWGSFL +CK+HKQFD+A
Sbjct: 315 KETGLEPRIQHYGCMVDMFGKAGLLEEAYEVIKEMEFEPNIVIWGSFLSACKMHKQFDIA 374

Query: 365 ERFIERIMSVVTP 403
           +R I +++  + P
Sbjct: 375 DRVIGQVLRDIKP 387


>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 319

 Score =  192 bits (487), Expect = 3e-47
 Identities = 89/134 (66%), Positives = 110/134 (82%)
 Frame = +2

Query: 2   VTWTALICGAAQHGFGKEALLLFDRMVESGVNPNELTFTGILSACAQAGLLEEGRKHFNM 181
           +TWTALICGAAQHG+ +E L LF+ M E+ + PNELTFTGIL+ CA +GL+EEG+K+F M
Sbjct: 142 MTWTALICGAAQHGYSEETLSLFNMMQEAKIRPNELTFTGILNVCAHSGLVEEGKKYFRM 201

Query: 182 IEAYCLRPRIQHYGCMVDLLGKAGLVVEAFEVIKTMPMEPNVVIWGSFLLSCKLHKQFDL 361
           IE Y L  RIQHYGCMVDL GKAGL+ EA+ VIKTM +E NVVIWGSFL +CK HK+FD+
Sbjct: 202 IEEYGLERRIQHYGCMVDLFGKAGLLDEAYNVIKTMKVENNVVIWGSFLSACKEHKKFDM 261

Query: 362 AERFIERIMSVVTP 403
           AER IE+++ V+ P
Sbjct: 262 AERVIEQVLKVIKP 275


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 436

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/133 (63%), Positives = 103/133 (77%)
 Frame = +2

Query: 5   TWTALICGAAQHGFGKEALLLFDRMVESGVNPNELTFTGILSACAQAGLLEEGRKHFNMI 184
           TWTALICG A HG  KEAL+LF+ M   GV PNE TFTG+LSAC  AGL++EGRK+FNMI
Sbjct: 257 TWTALICGLAHHGCCKEALVLFETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFNMI 316

Query: 185 EAYCLRPRIQHYGCMVDLLGKAGLVVEAFEVIKTMPMEPNVVIWGSFLLSCKLHKQFDLA 364
           E   L  RIQHYGC VDLLG++GL+ EA+ VIK+M +EPNV++W S L +CK HK FDLA
Sbjct: 317 EECGLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLA 376

Query: 365 ERFIERIMSVVTP 403
           ER IE+I+  + P
Sbjct: 377 ERVIEQILEKIEP 389


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