BLASTX nr result

ID: Lithospermum22_contig00042361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042361
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280378.2| PREDICTED: protein IQ-DOMAIN 32-like [Vitis ...    64   2e-08
emb|CBI19825.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002510501.1| hypothetical protein RCOM_1596950 [Ricinus c...    61   1e-07
ref|XP_002301992.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_004154914.1| PREDICTED: LOW QUALITY PROTEIN: protein IQ-D...    56   3e-06

>ref|XP_002280378.2| PREDICTED: protein IQ-DOMAIN 32-like [Vitis vinifera]
          Length = 605

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = -1

Query: 247 ERSAHERSETQGNKLIAGSRQASNPNFLAAQSKFKELSSVANLTKSMMSSTSQTAEDESY 68
           +R A E+ ET+G K + GSR+ SNP F+AAQSKF+ELSS AN +  ++S + Q    ES 
Sbjct: 397 KRFASEQLETEGKKFVFGSRKVSNPAFVAAQSKFEELSSTAN-SGRLISPSHQDVGVESN 455

Query: 67  VDTVSSFTD 41
           ++TVSS  D
Sbjct: 456 IETVSSAAD 464


>emb|CBI19825.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = -1

Query: 247 ERSAHERSETQGNKLIAGSRQASNPNFLAAQSKFKELSSVANLTKSMMSSTSQTAEDESY 68
           +R A E+ ET+G K + GSR+ SNP F+AAQSKF+ELSS AN +  ++S + Q    ES 
Sbjct: 288 KRFASEQLETEGKKFVFGSRKVSNPAFVAAQSKFEELSSTAN-SGRLISPSHQDVGVESN 346

Query: 67  VDTVSSFTD 41
           ++TVSS  D
Sbjct: 347 IETVSSAAD 355


>ref|XP_002510501.1| hypothetical protein RCOM_1596950 [Ricinus communis]
           gi|223551202|gb|EEF52688.1| hypothetical protein
           RCOM_1596950 [Ricinus communis]
          Length = 849

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = -1

Query: 247 ERSAHERSETQGNKLIAGSRQASNPNFLAAQSKFKELSSVANLTKSMMSSTSQTAEDESY 68
           +R A E+ ET+G K + GSR+ASNP F+AA SKF+ELS   N  KS +SS+ Q +  E  
Sbjct: 425 KRYASEQLETEGKKFVYGSRKASNPAFVAAHSKFEELSVTMNSNKS-LSSSYQDSGVELN 483

Query: 67  VDTVSS 50
           +DTVSS
Sbjct: 484 MDTVSS 489


>ref|XP_002301992.1| predicted protein [Populus trichocarpa] gi|222843718|gb|EEE81265.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
 Frame = -1

Query: 247 ERSAHERSETQGNKLIAGSRQASNPNFLAAQSKFKELSSVANLTKSMMSSTSQTAEDE-- 74
           +R A E+ ET+G K + GSR+ASNP F+AAQ+KF+ LSS A+L++S  SS   +  +   
Sbjct: 434 KRGASEQLETEGKKFVYGSRKASNPAFIAAQTKFEGLSSTASLSRSFSSSHQDSGVESNT 493

Query: 73  --SYVDTVS 53
             S +DT S
Sbjct: 494 EISGIDTES 502


>ref|XP_004154914.1| PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 32-like [Cucumis
           sativus]
          Length = 790

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = -1

Query: 232 ERSETQGNKLIAGSRQASNPNFLAAQSKFKELSSVANLTKSMMSSTSQTAEDESYVDTVS 53
           E+ E +  K I GSR+ASNP F+AAQSKF+ELSSV N  +S+ SS  +T   ES +  +S
Sbjct: 416 EQPEVKEKKTIFGSRRASNPAFIAAQSKFQELSSVENSGRSINSSYQETGA-ESCIGAMS 474

Query: 52  SFTDQPSRKD 23
           S +    R +
Sbjct: 475 SASGTAPRTE 484


Top