BLASTX nr result

ID: Lithospermum22_contig00042339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042339
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    70   2e-10
gb|ACU17851.1| unknown [Glycine max]                                   70   2e-10
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like...    67   2e-10
ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ...    69   4e-10

>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
 Frame = +3

Query: 3   NLRLLPQCTHAFHLPCIDTWLKTNTNCPLCRSS---AXXXXXXXXHVSNPXXXXXXXXXX 173
           +LRLLP+C+HAFHLPCIDTWLK++ +CPLCR++   A         V  P          
Sbjct: 151 SLRLLPKCSHAFHLPCIDTWLKSHASCPLCRANIAPANILPSEAPAVPEPVQENLPRTNV 210

Query: 174 XXMQ---R*SDLVLVVED-GGAYWRSNVEGAIRVVNHDDPPTENIIQTSNDDEMKRNGSR 341
             +Q     +D VLV++D  G+ +R   EG + +V  DD P   + Q   D E  + G+ 
Sbjct: 211 STLQYQHGTNDAVLVIQDLEGSTFRQ--EGVVSLVIGDDTPKTPVNQ---DLESSQTGTE 265

Query: 342 TD-QENVEHYMRSIS 383
               + ++   RS+S
Sbjct: 266 LQISDPIQPLRRSVS 280


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = +3

Query: 3   NLRLLPQCTHAFHLPCIDTWLKTNTNCPLCRSSAXXXXXXXXHVSNP 143
           ++RLLP+C+HAFHLPCIDTWLK++++CPLCR+S         HV++P
Sbjct: 154 SVRLLPKCSHAFHLPCIDTWLKSHSSCPLCRASIFTFNAAALHVASP 200


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = +3

Query: 3   NLRLLPQCTHAFHLPCIDTWLKTNTNCPLCRSSAXXXXXXXXHVSNP 143
           ++RLLP+C+HAFHLPCIDTWLK++++CPLCR+S         HV++P
Sbjct: 154 SVRLLPKCSHAFHLPCIDTWLKSHSSCPLCRASIFTFNAAALHVASP 200


>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 403

 Score = 67.4 bits (163), Expect(2) = 2e-10
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   NLRLLPQCTHAFHLPCIDTWLKTNTNCPLCRS 98
           NLRLLP+C HAFHLPCIDTWL+++TNCP+CR+
Sbjct: 193 NLRLLPKCQHAFHLPCIDTWLRSHTNCPMCRA 224



 Score = 22.3 bits (46), Expect(2) = 2e-10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 134 LESSNFVDSQYIFSSNAEI 190
           +ESS+FVDS  + +S+ E+
Sbjct: 230 IESSSFVDSNSLENSHMEV 248


>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
           gi|355522814|gb|AET03268.1| hypothetical protein
           MTR_8g066780 [Medicago truncatula]
          Length = 356

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = +3

Query: 3   NLRLLPQCTHAFHLPCIDTWLKTNTNCPLCRSSAXXXXXXXXHVSNP 143
           ++RLLP C H FHLPCIDTWLK+N++CPLCRSS         HV  P
Sbjct: 154 SVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTSNASTHHVQVP 200


Top