BLASTX nr result
ID: Lithospermum22_contig00042324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00042324
(705 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 115 1e-37
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 114 2e-37
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 115 3e-37
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 97 1e-31
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 97 1e-31
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 115 bits (289), Expect(3) = 1e-37
Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = +3
Query: 105 PLSPYLFLLCVEGLI*MLRRAEERKALSGIK*-RGTARVLVIYYLQTTLIFCRANVEEGA 281
P+SPYLFLLC + +L +A K + G + RG V +++ +++F +A+V+E +
Sbjct: 641 PISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECS 700
Query: 282 ELMIILGEYELASGQKVNISKCSVSFEP*VASVVRDQVVQILGMREV*DQGKYLGLRSHI 461
+ I+ +YE ASGQ+VN+SK V F V R +V +LG++EV Q KYLGL + I
Sbjct: 701 MVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTII 760
Query: 462 GRTKKEVFAYLVSKVEDRIRGRKGKLLS*VGLEVMIK*VAAAIQNH 599
GR+KK FA + ++ +++G K KLLS G EV+IK VA AI +
Sbjct: 761 GRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTY 806
Score = 45.1 bits (105), Expect(3) = 1e-37
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 595 IIDVFNCLMTKFFWDSSDKERGIHWKSWDALCDEK 699
+ID + L+ +F+W SSD R +HW SWD LC K
Sbjct: 817 LIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPK 851
Score = 42.7 bits (99), Expect(3) = 1e-37
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 VDWTMCLVSTMSYSFLINGAPRGYVQPTRGIRQGDPCHHIFF 126
+D M +S++S++F +NG G + P+RG+RQGDP F
Sbjct: 606 IDRVMACISSVSFTFNVNGVVEGSLSPSRGLRQGDPISPYLF 647
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 114 bits (286), Expect(3) = 2e-37
Identities = 65/166 (39%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Frame = +3
Query: 105 PLSPYLFLLCVEGLI*MLRRAEERKALSGIK*RGTA-RVLVIYYLQTTLIFCRANVEEGA 281
PLSPYLF+LC E LI +R+AE + ++GIK + V + + +L FC+AN E+
Sbjct: 422 PLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCG 481
Query: 282 ELMIILGEYELASGQKVNISKCSVSFEP*VASVVRDQVVQILGMREV*DQGKYLGLRSHI 461
++ IL +YE SGQ++N SK S+ F V ++ + ILG+ + G YLGL +
Sbjct: 482 IILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESL 541
Query: 462 GRTKKEVFAYLVSKVEDRIRGRKGKLLS*VGLEVMIK*VAAAIQNH 599
G +K +VF+++ +++ RI G K LS G EVMIK VAA + +
Sbjct: 542 GGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRY 587
Score = 48.1 bits (113), Expect(3) = 2e-37
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 1 VDWTMCLVSTMSYSFLINGAPRGYVQPTRGIRQGDPCHHIFF 126
+ W M ++T+ Y LING P+G + P RG+RQGDP F
Sbjct: 387 ISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLF 428
Score = 40.0 bits (92), Expect(3) = 2e-37
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 619 MTKFFWDSSDKERGIHWKSWDALCDEK 699
+ KF+W S+ RG+HW +WD LC K
Sbjct: 606 VAKFWWSSNGDSRGMHWMAWDKLCSSK 632
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 115 bits (287), Expect(3) = 3e-37
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = +3
Query: 105 PLSPYLFLLCVEGLI*MLRRAEERKALSGIK*R-GTARVLVIYYLQTTLIFCRANVEEGA 281
PLSPYLF+LC E LI +R+AE+ K ++GIK + V + + +L FC+AN E+
Sbjct: 488 PLSPYLFILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCG 547
Query: 282 ELMIILGEYELASGQKVNISKCSVSFEP*VASVVRDQVVQILGMREV*DQGKYLGLRSHI 461
++ IL +YE SGQ +N SK S+ F V ++ ++ LG+ + G YLGL +
Sbjct: 548 VILGILKQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSALGIHSIGGMGSYLGLPESL 607
Query: 462 GRTKKEVFAYLVSKVEDRIRGRKGKLLS*VGLEVMIK*VAAAIQNH 599
G +K +F+++ +++ RI G K LS G EVMIK V A + +
Sbjct: 608 GGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTY 653
Score = 48.5 bits (114), Expect(3) = 3e-37
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 1 VDWTMCLVSTMSYSFLINGAPRGYVQPTRGIRQGDPCHHIFF 126
+ W M ++T+ Y L+NG PRG + P RG+RQGDP F
Sbjct: 453 ISWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLF 494
Score = 38.5 bits (88), Expect(3) = 3e-37
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 619 MTKFFWDSSDKERGIHWKSWDALCDEK 699
+ KF+W S + RG+HW +W+ LC K
Sbjct: 672 VAKFWWSSDGESRGMHWMAWNKLCSSK 698
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 96.7 bits (239), Expect(3) = 1e-31
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 105 PLSPYLFLLCVEGLI*MLRRAEERKALSGIK*-RGTARVLVIYYLQTTLIFCRANVEEGA 281
PLSPYLF+LC + L ++ L G++ G + + + +L FC+ANV
Sbjct: 1020 PLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQ 1079
Query: 282 ELMIILGEYELASGQKVNISKCSVSFEP*VASVVRDQVVQILGMREV*DQGKYLGLRSHI 461
L + YE SGQK+N+ K ++F V + ++ QIL + GKYLGL
Sbjct: 1080 ALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQF 1139
Query: 462 GRTKKEVFAYLVSKVEDRIRGRKGKLLS*VGLEVMIK*VAAAI 590
GR KKE+F Y++ +V+ R + LS G E+M+K VA A+
Sbjct: 1140 GRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAM 1182
Score = 55.1 bits (131), Expect(3) = 1e-31
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 1 VDWTMCLVSTMSYSFLINGAPRGYVQPTRGIRQGDPCHHIFF 126
+ W M V ++ YS LING+P GY+ PTRGIRQGDP F
Sbjct: 985 IGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLF 1026
Score = 31.2 bits (69), Expect(3) = 1e-31
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 595 IIDVFNCLMTKFFWDSSDKERGIHWKSWDALCDEKFE 705
I+ L+ F+W+ + +RGI W +W L K E
Sbjct: 1196 IVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKE 1232
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 96.7 bits (239), Expect(3) = 1e-31
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 105 PLSPYLFLLCVEGLI*MLRRAEERKALSGIK*-RGTARVLVIYYLQTTLIFCRANVEEGA 281
PLSPYLF+LC + L ++ L G++ G + + + +L FC+ANV
Sbjct: 794 PLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQ 853
Query: 282 ELMIILGEYELASGQKVNISKCSVSFEP*VASVVRDQVVQILGMREV*DQGKYLGLRSHI 461
L + YE SGQK+N+ K ++F V + ++ QIL + GKYLGL
Sbjct: 854 ALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQF 913
Query: 462 GRTKKEVFAYLVSKVEDRIRGRKGKLLS*VGLEVMIK*VAAAI 590
GR KKE+F Y++ +V+ R + LS G E+M+K VA A+
Sbjct: 914 GRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAM 956
Score = 55.1 bits (131), Expect(3) = 1e-31
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 1 VDWTMCLVSTMSYSFLINGAPRGYVQPTRGIRQGDPCHHIFF 126
+ W M V ++ YS LING+P GY+ PTRGIRQGDP F
Sbjct: 759 IGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLF 800
Score = 31.2 bits (69), Expect(3) = 1e-31
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 595 IIDVFNCLMTKFFWDSSDKERGIHWKSWDALCDEKFE 705
I+ L+ F+W+ + +RGI W +W L K E
Sbjct: 970 IVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKE 1006