BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042239
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|NP_198751.1| pentatricopeptide repeat-containing protein [Ar...    67   2e-09
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]         66   3e-09
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]    66   3e-09

>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
 Frame = -2

Query: 368 MNGKNLAKPFSTTLKRLTTT--PPVAPRWEPLLFHCANTKNLATTKKLHTCILTSGTLVS 195
           MNG     P  TT+ + T     P   +++ LL H    ++L +TK+LH  ++TSG L  
Sbjct: 1   MNG-----PTKTTISKTTKLLLAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLL-- 53

Query: 194 SSNPTHLMSLLVSAYSHCGDFTYACHLFDKMPHRTSRVYRAMIRMHVEKGSPNNALKLFL 15
                 + S+LV+ Y+HCG    A  LFD++  R + +Y  MI+M++ KG    A+K+FL
Sbjct: 54  ---SIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFL 110

Query: 14  DML 6
           +ML
Sbjct: 111 EML 113


>ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39350 gi|10177683|dbj|BAB11009.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332007040|gb|AED94423.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/111 (32%), Positives = 62/111 (55%)
 Frame = -2

Query: 338 STTLKRLTTTPPVAPRWEPLLFHCANTKNLATTKKLHTCILTSGTLVSSSNPTHLMSLLV 159
           S  L+R         +++ LL H A T++++ TK LH  ++T G +       H++S L 
Sbjct: 2   SEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG-----HILSTLS 56

Query: 158 SAYSHCGDFTYACHLFDKMPHRTSRVYRAMIRMHVEKGSPNNALKLFLDML 6
             Y+ CG  TYA  LF++MP  +   Y  +IRM+V +G  ++A+ +F+ M+
Sbjct: 57  VTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV 107


>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/98 (41%), Positives = 60/98 (61%)
 Frame = -2

Query: 299 APRWEPLLFHCANTKNLATTKKLHTCILTSGTLVSSSNPTHLMSLLVSAYSHCGDFTYAC 120
           A + E LL   + +++ + TK+LH  ILT G + SSSN   L S L + Y+ C   +YA 
Sbjct: 11  AAQCESLLGKFSASQSHSETKRLHALILTLG-IFSSSN---LCSKLATTYAQCHHASYAS 66

Query: 119 HLFDKMPHRTSRVYRAMIRMHVEKGSPNNALKLFLDML 6
           HLFDK+       + AM+RM+V+ G P +AL LF++ML
Sbjct: 67  HLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEML 104


>gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/105 (38%), Positives = 53/105 (50%)
 Frame = -2

Query: 320 LTTTPPVAPRWEPLLFHCANTKNLATTKKLHTCILTSGTLVSSSNPTHLMSLLVSAYSHC 141
           +T T  VA     LL   A  ++ A T  LH  +L SG L S   P    + L+ AY  C
Sbjct: 21  ITPTSSVA-----LLRGAAERRDTALTSALHAALLKSGALRSRQAPLAAANSLLHAYLQC 75

Query: 140 GDFTYACHLFDKMPHRTSRVYRAMIRMHVEKGSPNNALKLFLDML 6
           G  + A  L D+MP R +  Y  +I  H   G+P +AL+ FLDML
Sbjct: 76  GLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDML 120


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/96 (38%), Positives = 58/96 (60%)
 Frame = -2

Query: 293 RWEPLLFHCANTKNLATTKKLHTCILTSGTLVSSSNPTHLMSLLVSAYSHCGDFTYACHL 114
           R++ LL  C + K++  TK++H   +T G L+SS    HL+S L +AY+ CG   +A  L
Sbjct: 20  RYQSLLQRCTSRKSIPNTKQIHAHTITLG-LLSSPYSHHLLSSLAAAYAMCGCAPHARKL 78

Query: 113 FDKMPHRTSRVYRAMIRMHVEKGSPNNALKLFLDML 6
           FD++ + +   + AMIRM+   G   +AL LF+ ML
Sbjct: 79  FDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQML 114