BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042222
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l...    64   1e-08
ref|XP_004150276.1| PREDICTED: pre-mRNA-processing protein 40B-l...    64   1e-08
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...    63   3e-08
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    62   5e-08

>ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
 Frame = +1

Query: 229 QFRPVLPAQPVQAYNLAGTQQFQPP----SYASMGMPP-PTQSQFAQPLPHGPPRPSTAV 393
           QFRPV P QP Q +    +  FQP     +  + G+PP P Q QF  P+   P RP+   
Sbjct: 11  QFRPVGPVQPSQQFIPVSSPHFQPVGRGVTVMNPGLPPQPPQPQFPHPMQQLPARPNQPS 70

Query: 394 HSLPPGQAIPVPDFQLNRPV---APLPVPPQQNVQIANSYM 507
              PP QAIP+P+ Q NR V   +PLP P   +VQ  NSYM
Sbjct: 71  LGPPPPQAIPLPNAQPNRHVMSGSPLPPP---SVQTPNSYM 108


>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 983

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
 Frame = +1

Query: 130 MANNSQFXXXXXXXXXXXXXXXXSQNGVSSLSRQFRPVLPAQPVQAYNLAGTQQFQPPSY 309
           MANN Q+                 ++ V  ++ QFRP +P    Q +    +  FQP   
Sbjct: 1   MANNPQYSGLQPLRPPVVGPMDQGRSFVPPMTAQFRPAVPGPHSQQFVPLPSPHFQPLGQ 60

Query: 310 A----SMGMPPPT----QSQFAQPLPHGPPRPSTAVHSLPPGQAIPVPDFQLNRPVAP 459
                + GMPPP     QSQF+QP+ H P RP   VH   P Q IP+P  Q NR   P
Sbjct: 61  GVPLMNAGMPPPPPQAQQSQFSQPVAHLPLRPCEPVHGTLPPQTIPLPVAQQNRQYTP 118


>ref|XP_004150276.1| PREDICTED: pre-mRNA-processing protein 40B-like [Cucumis sativus]
          Length = 211

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
 Frame = +1

Query: 130 MANNSQFXXXXXXXXXXXXXXXXSQNGVSSLSRQFRPVLPAQPVQAYNLAGTQQFQPPSY 309
           MANN Q+                 ++ V  ++ QFRP +P    Q +    +  FQP   
Sbjct: 1   MANNPQYSGLQPLRPPVVGPMDQGRSFVPPMTAQFRPAVPGPHSQQFVPLPSPHFQPLGQ 60

Query: 310 A----SMGMPPPT----QSQFAQPLPHGPPRPSTAVHSLPPGQAIPVPDFQLNRPVAP 459
                + GMPPP     QSQF+QP+ H P RP   VH   P Q IP+P  Q NR   P
Sbjct: 61  GVPLMNAGMPPPPPQPQQSQFSQPVAHLPLRPCEPVHGTLPPQTIPLPVAQQNRQYTP 118


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1002

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
 Frame = +1

Query: 205 NGVSSLSRQFRPVLPAQPVQAYNLAGTQQFQPPSYA----SMGMP--PPTQSQFAQPLPH 366
           N     S QFRPV  AQ  Q +    +QQF P  +A    + GMP     Q Q++QP+  
Sbjct: 3   NNSQPSSMQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQ 62

Query: 367 GPPRPSTAVHSLPPGQAIPVPDFQLNRPVAPLPVPPQQNVQIANSYM 507
              RP    H  P  QAIP+   Q NRP+  +P   QQNV   +++M
Sbjct: 63  LTQRPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHM 109


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 50/144 (34%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
 Frame = +1

Query: 103 FIEKTESAGMANNSQFXXXXXXXXXXXXXXXXSQNGVSSLSRQFRPVLPAQPVQAYNLAG 282
           F E    AGMANN Q                  QN    LS QFRP +P Q    +  A 
Sbjct: 6   FEEACLCAGMANNPQ-SSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAA 64

Query: 283 TQQFQPP----SYASMGMP-----PPTQSQFAQPLPHGPPRPSTAVHSLPPGQAIPVPDF 435
           +QQF+P     S  ++G P     PP   QF+Q +   PPRP+      P  Q IP+P  
Sbjct: 65  SQQFRPIGQNISSPNVGGPSGQNQPP---QFSQAMQQLPPRPNQPGPIAPSSQPIPMPYI 121

Query: 436 QLNRPVAPLPVPPQQNVQIANSYM 507
           Q NRP+      P Q     NS+M
Sbjct: 122 QQNRPLTSSSPQPNQTAPPLNSHM 145