BLASTX nr result

ID: Lithospermum22_contig00042130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042130
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    84   9e-15
ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    83   2e-14
emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]    82   5e-14
ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    80   2e-13
ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...    78   8e-13

>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 SLAKITFWSLVFVGLIYVXXXXXXXXXXXXXXXXXXSLRT----SRDWEQRVRASAKIRS 71
           SLAK+TFWS VF+GLI++                  SLRT       WE+RVR+SAK+R+
Sbjct: 31  SLAKLTFWSFVFLGLIFIFFFLSPSSSSLPSDPSRRSLRTYSWGGPAWEKRVRSSAKVRA 90

Query: 70  QKGISVLVTGAAGFVGTHVSAAL 2
           + GISVLVTGAAGFVGTHVSAAL
Sbjct: 91  RNGISVLVTGAAGFVGTHVSAAL 113


>ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 512

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 SLAKITFWSLVFVGLIYVXXXXXXXXXXXXXXXXXXSLRTSR----DWEQRVRASAKIRS 71
           SLAK+TFWS VF GLI++                  SLRT       WE+RVR+SAK+R+
Sbjct: 110 SLAKLTFWSFVFSGLIFIVLFLSPSSSSLPSDPTRRSLRTHSWGGPAWEKRVRSSAKVRA 169

Query: 70  QKGISVLVTGAAGFVGTHVSAAL 2
           + GISVLVTGAAGFVGTHVSAAL
Sbjct: 170 RNGISVLVTGAAGFVGTHVSAAL 192


>emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]
          Length = 427

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 SLAKITFWSLVFVGLIYVXXXXXXXXXXXXXXXXXXSLRT----SRDWEQRVRASAKIRS 71
           SLAK+TFWS VF+GLI++                  SLRT       WE+RVR+SAK+ +
Sbjct: 25  SLAKLTFWSFVFLGLIFIFFFLSPSSSSLPSDPSRRSLRTYSWGGPAWEKRVRSSAKVXA 84

Query: 70  QKGISVLVTGAAGFVGTHVSAAL 2
           + GISVLVTGAAGFVGTHVSAAL
Sbjct: 85  RNGISVLVTGAAGFVGTHVSAAL 107


>ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 SLAKITFWSLVFVGLIYVXXXXXXXXXXXXXXXXXXSLRT----SRDWEQRVRASAKIRS 71
           SLAK+TFWS VF GLI++                  S R+       WE+RVR+SAK+R+
Sbjct: 31  SLAKLTFWSFVFSGLIFIFFFRSPSSSSLPSDSSIRSFRSYSWGGPAWEKRVRSSAKVRA 90

Query: 70  QKGISVLVTGAAGFVGTHVSAAL 2
           + GISVLVTGAAGFVGTHVSAAL
Sbjct: 91  RNGISVLVTGAAGFVGTHVSAAL 113


>ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318808|gb|EFH49230.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 SLAKITFWSLVFVGLIYVXXXXXXXXXXXXXXXXXXSLRT----SRDWEQRVRASAKIRS 71
           S+AK+ FWSLVFVGLI++                   LRT       WE+RVR+SA++R+
Sbjct: 29  SVAKLAFWSLVFVGLIFIFFYRSPVSSNPDPSRRS--LRTYSWGGPAWEKRVRSSARVRT 86

Query: 70  QKGISVLVTGAAGFVGTHVSAAL 2
           ++G SVLVTGAAGFVGTHVSAAL
Sbjct: 87  RRGFSVLVTGAAGFVGTHVSAAL 109


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