BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042075
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    91   8e-17
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    91   8e-17
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    89   5e-16
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    88   6e-16
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    88   8e-16

>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
 Frame = -2

Query: 222 NHTDFQYFTN---TQGIVHYKTCVFKPQQDGVVERKHQHLLQVPRALMIQSFLQVKFWGD 52
           N T+F   ++    QGIVH  +CV  PQQ+G VERKH+H+L V RAL+ Q+ L +KFWG+
Sbjct: 637 NGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGE 696

Query: 51  AVMAATYLINRTPSSI 4
           AVM A YLINRTPSSI
Sbjct: 697 AVMTAAYLINRTPSSI 712


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
 Frame = -2

Query: 222 NHTDFQYFTN---TQGIVHYKTCVFKPQQDGVVERKHQHLLQVPRALMIQSFLQVKFWGD 52
           N T+F   ++    QGIVH  +CV  PQQ+G VERKH+H+L V RAL+ Q+ L +KFWG+
Sbjct: 637 NGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGE 696

Query: 51  AVMAATYLINRTPSSI 4
           AVM A YLINRTPSSI
Sbjct: 697 AVMTAAYLINRTPSSI 712


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = -2

Query: 222 NHTDFQY--FTNTQGIVHYKTCVFKPQQDGVVERKHQHLLQVPRALMIQSFLQVKFWGDA 49
           N  +F++  F +++GI+H  +C+  PQQ+GVVERKH+HLL V RAL+ QS L   FWGDA
Sbjct: 655 NGPEFKHTQFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDA 714

Query: 48  VMAATYLINRTPSSIL 1
           ++ A YLINRTP+ +L
Sbjct: 715 ILTAAYLINRTPTPLL 730


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -2

Query: 201 FTNTQGIVHYKTCVFKPQQDGVVERKHQHLLQVPRALMIQSFLQVKFWGDAVMAATYLIN 22
           F  + GI+H  TCV  PQQ+GVVERKH+HLL+  RAL+ QS L  KFWGD ++ ATYLIN
Sbjct: 153 FLASLGIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLIN 212

Query: 21  RTPSSIL 1
           R PS +L
Sbjct: 213 RFPSKVL 219


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
 Frame = -2

Query: 222 NHTDFQYFTN---TQGIVHYKTCVFKPQQDGVVERKHQHLLQVPRALMIQSFLQVKFWGD 52
           N T+F   ++     GI+H  +CV  PQQ+G VERKH+H+L V RAL+ Q+ L +KFWG+
Sbjct: 654 NGTEFMCLSSYFRENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGE 713

Query: 51  AVMAATYLINRTPSSIL 1
           +++ A YLINRTPSSIL
Sbjct: 714 SILTAAYLINRTPSSIL 730