BLASTX nr result

ID: Lithospermum22_contig00042064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042064
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64769.1| hypothetical protein VITISV_010312 [Vitis vinifera]    77   2e-12
ref|XP_002514759.1| conserved hypothetical protein [Ricinus comm...    72   7e-11
ref|XP_002522434.1| conserved hypothetical protein [Ricinus comm...    66   4e-09
ref|XP_002312244.1| predicted protein [Populus trichocarpa] gi|2...    65   9e-09

>emb|CAN64769.1| hypothetical protein VITISV_010312 [Vitis vinifera]
          Length = 94

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/96 (42%), Positives = 59/96 (61%)
 Frame = +3

Query: 51  MDYSPCRVIILVLCIGILYTQQEQVSALSSMDLALKWGDIYLSLSPRSPRSMQDVTFHDQ 230
           M +S  RV++ ++CIG+L  + ++VS L S+DL L+       L+P++ R ++ V   D 
Sbjct: 1   MVFSAQRVLVFLICIGVLAVEPDKVSGLRSIDLVLRQSQEDHMLAPKNQRILKAVVVEDL 60

Query: 231 QSQMNIAPAPFTSSFDPNLSSKRRVHRGSDPIHNKS 338
             + N AP      FD N SSKRRV RGSDPIHN+S
Sbjct: 61  NREENAAPV--NKKFDLNQSSKRRVRRGSDPIHNRS 94


>ref|XP_002514759.1| conserved hypothetical protein [Ricinus communis]
           gi|223546363|gb|EEF47865.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 43/96 (44%), Positives = 61/96 (63%)
 Frame = +3

Query: 48  SMDYSPCRVIILVLCIGILYTQQEQVSALSSMDLALKWGDIYLSLSPRSPRSMQDVTFHD 227
           +M +   R  +L+LCIG L  Q E+VS+L+S+DLAL+     L ++  S R +  V   D
Sbjct: 32  NMGFLVHRGFLLLLCIGYLSFQPEKVSSLTSIDLALRLKQELLPVAQNS-RMLTTVALDD 90

Query: 228 QQSQMNIAPAPFTSSFDPNLSSKRRVHRGSDPIHNK 335
            Q+  + APAP +  FDPN S+KR V +GSDPIHN+
Sbjct: 91  LQTFTSSAPAP-SMVFDPNQSNKRTVRKGSDPIHNR 125


>ref|XP_002522434.1| conserved hypothetical protein [Ricinus communis]
           gi|223538319|gb|EEF39926.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 97

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = +3

Query: 51  MDYSPCRVIILVLCIGILYTQQEQVSALSSMDLALK--WGDIYLSLSPRSPRSMQDVTFH 224
           M  S  RV+I+ +CIG L  Q  Q   L+S++LA +    D   ++S  S R ++DV+  
Sbjct: 1   MVVSAHRVLIVFICIGFLAAQSNQAYGLTSIELATRDRKTDPGRTVSS-SQRILEDVSMQ 59

Query: 225 DQQSQMNIAPAPFTSSFDPNLSSKRRVHRGSDPIHNKS 338
              ++M    A    + DPN SSKRRV RGSDPIHN+S
Sbjct: 60  SMNTEMQKKSAYLNKANDPNQSSKRRVRRGSDPIHNRS 97


>ref|XP_002312244.1| predicted protein [Populus trichocarpa] gi|222852064|gb|EEE89611.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/89 (39%), Positives = 54/89 (60%)
 Frame = +3

Query: 69  RVIILVLCIGILYTQQEQVSALSSMDLALKWGDIYLSLSPRSPRSMQDVTFHDQQSQMNI 248
           RV+IL++CIG +  Q ++V  L+S++L L+        +P+S R ++DV   D Q     
Sbjct: 7   RVLILLICIGFIAVQPDEVYGLTSVELVLRHNQKAQGTAPQSQRVLKDV---DMQGMDTK 63

Query: 249 APAPFTSSFDPNLSSKRRVHRGSDPIHNK 335
             A  + +FD + S+KRR  RGSDPIHN+
Sbjct: 64  KSAHASKTFDRSQSNKRRAPRGSDPIHNR 92


Top