BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00042062
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD45567.1| reverse transcriptase [Elaeis guineensis]             106   3e-23
gb|AAX62235.1| reverse transcriptase [Peperomia caperata] gi|620...   107   7e-23
gb|ACZ36938.1| reverse transcriptase, partial [Prunus mume]           103   2e-22
dbj|BAB40831.1| reverse transcriptase [Chrysanthemum x morifolium]    101   2e-22
emb|CAA73042.1| polyprotein [Ananas comosus]                          104   2e-22

>emb|CAD45567.1| reverse transcriptase [Elaeis guineensis]
          Length = 138

 Score =  106 bits (265), Expect(2) = 3e-23
 Identities = 50/72 (69%), Positives = 62/72 (86%)
 Frame = -3

Query: 295 LNYKQLNKITIQSRCPLSRIDDLFDQLTCACIFSKIDLRSA*HQLRIKDKVVSKSTFRTR 116
           ++Y++LNK+TI+++ PL RIDDLFDQL  A +FSKIDLRS  HQLRI+D+ V K+ FRTR
Sbjct: 3   VDYRELNKVTIKNKYPLPRIDDLFDQLQGAQVFSKIDLRSGYHQLRIRDEDVPKTAFRTR 62

Query: 115 YGHYEFLVMPFG 80
           YGHYEFLVMPFG
Sbjct: 63  YGHYEFLVMPFG 74



 Score = 26.6 bits (57), Expect(2) = 3e-23
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -2

Query: 80  LTNVPAYFMDL---IRCPCLDKILVVLI 6
           LTN PA FMD+   I  P LD+ +VV I
Sbjct: 75  LTNAPAAFMDMMNRIFKPYLDQFIVVFI 102


>gb|AAX62235.1| reverse transcriptase [Peperomia caperata]
           gi|62082819|gb|AAX62237.1| reverse transcriptase
           [Peperomia caperata]
          Length = 116

 Score =  107 bits (266), Expect(2) = 7e-23
 Identities = 49/72 (68%), Positives = 62/72 (86%)
 Frame = -3

Query: 295 LNYKQLNKITIQSRCPLSRIDDLFDQLTCACIFSKIDLRSA*HQLRIKDKVVSKSTFRTR 116
           ++Y++LNK+TI+++ PL RIDDLFDQL  A +FSKIDLRS  HQL+I+DK + K+ FRTR
Sbjct: 7   VDYRELNKVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLKIQDKDIPKTAFRTR 66

Query: 115 YGHYEFLVMPFG 80
           YGHYEFLVMPFG
Sbjct: 67  YGHYEFLVMPFG 78



 Score = 25.0 bits (53), Expect(2) = 7e-23
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -2

Query: 80  LTNVPAYFMDLIR---CPCLDKILVVLI 6
           LTN PA FMDL+       LDK ++V I
Sbjct: 79  LTNAPAAFMDLMNRVFRDYLDKFVIVFI 106


>gb|ACZ36938.1| reverse transcriptase, partial [Prunus mume]
          Length = 143

 Score =  103 bits (258), Expect(2) = 2e-22
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = -3

Query: 295 LNYKQLNKITIQSRCPLSRIDDLFDQLTCACIFSKIDLRSA*HQLRIKDKVVSKSTFRTR 116
           ++Y+QLN+ITI+++ PL RIDDLFDQL  +  FSKIDLRS  HQLR+K + VSK+ FRTR
Sbjct: 4   VDYRQLNRITIKNKYPLPRIDDLFDQLQGSRYFSKIDLRSGYHQLRVKAEDVSKTAFRTR 63

Query: 115 YGHYEFLVMPFG 80
           YGHYEFLVMPFG
Sbjct: 64  YGHYEFLVMPFG 75



 Score = 26.9 bits (58), Expect(2) = 2e-22
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -2

Query: 80  LTNVPAYFMDLIR---CPCLDKILVVLI 6
           LTN PA FMDL+     P LD+ ++V I
Sbjct: 76  LTNAPAVFMDLMNRVFQPYLDQFVIVFI 103


>dbj|BAB40831.1| reverse transcriptase [Chrysanthemum x morifolium]
          Length = 143

 Score =  101 bits (251), Expect(2) = 2e-22
 Identities = 45/72 (62%), Positives = 61/72 (84%)
 Frame = -3

Query: 295 LNYKQLNKITIQSRCPLSRIDDLFDQLTCACIFSKIDLRSA*HQLRIKDKVVSKSTFRTR 116
           ++Y++LNK+TI++R PL RIDDLFDQL  + ++SKIDLRS  HQLR++++ + K+ FRTR
Sbjct: 4   VDYRELNKLTIKNRYPLPRIDDLFDQLQGSSVYSKIDLRSGYHQLRVREEDIPKTAFRTR 63

Query: 115 YGHYEFLVMPFG 80
           YGHYEF VMPFG
Sbjct: 64  YGHYEFQVMPFG 75



 Score = 29.6 bits (65), Expect(2) = 2e-22
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -2

Query: 80  LTNVPAYFMDLIRCPC---LDKILVVLI 6
           LTN PA FMDL+   C   LDK ++V I
Sbjct: 76  LTNAPAVFMDLMNRVCKPYLDKFMIVFI 103


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  104 bits (260), Expect(2) = 2e-22
 Identities = 47/72 (65%), Positives = 62/72 (86%)
 Frame = -3

Query: 295 LNYKQLNKITIQSRCPLSRIDDLFDQLTCACIFSKIDLRSA*HQLRIKDKVVSKSTFRTR 116
           ++Y++LNK+TI+++ PL RIDDLFDQL  +C++SKIDL+S  HQL+IK + VSK+ FRTR
Sbjct: 71  VDYRELNKVTIKNKYPLPRIDDLFDQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTR 130

Query: 115 YGHYEFLVMPFG 80
           YGHYEF VMPFG
Sbjct: 131 YGHYEFAVMPFG 142



 Score = 25.8 bits (55), Expect(2) = 2e-22
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -2

Query: 80  LTNVPAYFMDLIR---CPCLDKILVVLI 6
           LTN P  FMDL+     P LD+ +VV I
Sbjct: 143 LTNAPTAFMDLMNRVFKPYLDRFVVVFI 170