BLASTX nr result

ID: Lithospermum22_contig00041968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041968
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545736.1| PREDICTED: uncharacterized protein LOC100806...   188   8e-46
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]     131   3e-36
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]     126   3e-35
emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]   125   1e-34
ref|XP_003560162.1| PREDICTED: putative nuclease HARBI1-like [Br...   127   2e-32

>ref|XP_003545736.1| PREDICTED: uncharacterized protein LOC100806549 [Glycine max]
          Length = 418

 Score =  188 bits (477), Expect = 8e-46
 Identities = 92/157 (58%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = +1

Query: 103 KNLLVDAGYTNGPGFLALYRNTRYHLKLWRGNTPQNYKELFNLRHSSARNSIEWAFGLLK 282
           K  LVDAGYTNGPGFLA YR TRYHL  W  NTPQNYKELFNLRH+SARN IE +FG+LK
Sbjct: 256 KYFLVDAGYTNGPGFLAPYRGTRYHLNEWIRNTPQNYKELFNLRHASARNVIERSFGVLK 315

Query: 283 KRWEILRTPNFYPLKTQIRVINACWILHNFLRDEMPDDELLDQVDKRFEN--NTEGADDF 456
           KRW ILRTP+F+ +KTQIR+INAC++LHNF+RDE   D +L+  D    +  + E  +  
Sbjct: 316 KRWSILRTPSFFDIKTQIRIINACFMLHNFIRDEQHSDPILEAQDLELLSVVDNELINQQ 375

Query: 457 EHEIVREEEDQITSIRVTNEWTAF*DNLAMQMFEEYQ 567
              +     D++T+I+ T EWT F D LAM MF  YQ
Sbjct: 376 MERVTNNIGDEVTTIQATEEWTRFRDTLAMNMFATYQ 412


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score =  131 bits (330), Expect(2) = 3e-36
 Identities = 74/157 (47%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
 Frame = +1

Query: 112 LVDAGYTNGPGFLALYRNTRYHLKLWRG--NTPQNYKELFNLRHSSARNSIEWAFGLLKK 285
           L DAGY N  GFLA Y+  RYHL+ WRG  N P N KE FN++HSSARN IE AFG+LK 
Sbjct: 190 LCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKG 249

Query: 286 RWEILRTPNFYPLKTQIRVINACWILHNFLRDEMP---DDELLDQVDKRFENNTEGADDF 456
           RW ILR  ++YPL+ Q R I AC +LHN +  EM    D E  D+ D  +   T   D  
Sbjct: 250 RWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASED-- 307

Query: 457 EHEIVREEEDQITSIRVTNEWTAF*DNLAMQMFEEYQ 567
                      I  I  TNEW+ + D+LA  MF ++Q
Sbjct: 308 -----------IQYIETTNEWSQWRDDLATSMFTDWQ 333



 Score = 46.2 bits (108), Expect(2) = 3e-36
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +2

Query: 2   CDPNLKFFYVLSGWEGSASDSKVLHSVIHRPNGLRI 109
           CD    F YVL+GWEGSA+DS++L   I + NGL++
Sbjct: 148 CDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQV 183


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score =  126 bits (317), Expect(2) = 3e-35
 Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
 Frame = +1

Query: 112 LVDAGYTNGPGFLALYRNTRYHLKLWRG--NTPQNYKELFNLRHSSARNSIEWAFGLLKK 285
           LVD GY N  GFLA YR  RYHL+ WRG  N P   KE FN++H SARN IE AFG+LK 
Sbjct: 218 LVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKG 277

Query: 286 RWEILRTPNFYPLKTQIRVINACWILHNFLRDEMPDDELLDQVDKRFENN-TEGADDFEH 462
           RW ILR  ++YP++ Q R I AC +LHN +  EM + ++ D +D+    + T  ADD  +
Sbjct: 278 RWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHY 337

Query: 463 EIVREEEDQITSIRVTNEWTAF*DNLAMQM 552
                       I  +NEW+ + DNLA ++
Sbjct: 338 ------------IETSNEWSQWRDNLAEEI 355



 Score = 47.8 bits (112), Expect(2) = 3e-35
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +2

Query: 2   CDPNLKFFYVLSGWEGSASDSKVLHSVIHRPNGLRI 109
           CD    F YVL+GWEGSA+DS++L   + RPN L++
Sbjct: 176 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKV 211


>emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]
          Length = 579

 Score =  125 bits (313), Expect(2) = 1e-34
 Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +1

Query: 112 LVDAGYTNGPGFLALYRNTRYHLKLWR-GNTPQNYKELFNLRHSSARNSIEWAFGLLKKR 288
           LVD GYTNG GFLA YR  RYHL  WR G+ P  ++E FN++HS+ARN IE  FGLLK R
Sbjct: 249 LVDVGYTNGKGFLAPYRGQRYHLNDWREGHMPTTHEEFFNMKHSAARNVIERCFGLLKLR 308

Query: 289 WEILRTPNFYPLKTQIRVINACWILHNFLRDEMPDDELLDQVD 417
           W ILR+P FYP+KTQ ++I AC ++HN ++ EM  D L  ++D
Sbjct: 309 WAILRSPCFYPIKTQCKIILACCLIHNLIKREMXVDPLEQELD 351



 Score = 47.4 bits (111), Expect(2) = 1e-34
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 2   CDPNLKFFYVLSGWEGSASDSKVLHSVIHRPNGLRI 109
           C  +++F YVL GWEGS SDS+VL   + R NGL +
Sbjct: 207 CSQDMQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTV 242


>ref|XP_003560162.1| PREDICTED: putative nuclease HARBI1-like [Brachypodium distachyon]
          Length = 406

 Score =  127 bits (318), Expect(2) = 2e-32
 Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
 Frame = +1

Query: 103 KNLLVDAGYTNGPGFLALYRNTRYHLKLWRGNT--PQNYKELFNLRHSSARNSIEWAFGL 276
           K  LVDAGYTNGPGFL+ +++TRYHLK W  +   P   KEL+NLRHS ARN +E  FGL
Sbjct: 256 KFYLVDAGYTNGPGFLSPFQSTRYHLKEWVSSQQQPHTAKELYNLRHSRARNVVERTFGL 315

Query: 277 LKKRWEILRTPNFYPLKTQIRVINACWILHNFLRD--EMPDDELLDQVD 417
            KK+W ILRT  F+ +K QIR+INAC +LHNF+RD   + D+ LL +VD
Sbjct: 316 WKKKWAILRTQFFFDIKDQIRIINACCVLHNFIRDRKHVRDNLLLPEVD 364



 Score = 37.7 bits (86), Expect(2) = 2e-32
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +2

Query: 5   DPNLKFFYVLSGWEGSASDSKVLHSVIHRPN 97
           D N+K  YVL GWEGS  DS+VL   + RPN
Sbjct: 216 DWNMKILYVLPGWEGSTLDSRVLRDAM-RPN 245


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