BLASTX nr result

ID: Lithospermum22_contig00041949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041949
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632370.1| PREDICTED: cyclin-dependent kinase inhibitor...    57   2e-06
gb|AEZ35251.1| cyclin-dependent kinase inhibitor [Persea americana]    55   6e-06

>ref|XP_003632370.1| PREDICTED: cyclin-dependent kinase inhibitor 3-like [Vitis
           vinifera] gi|297744341|emb|CBI37311.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
 Frame = -2

Query: 422 MGKLMRKEKLTSE------TPSLGVRTRAKTLALQRL----------PEYCYLQLRSRRL 291
           MGK M+K K+T +      + SLGVRTRAKTLALQRL          P+  YL+LRSRRL
Sbjct: 1   MGKYMKKAKITGDVTVMEVSSSLGVRTRAKTLALQRLQKTTHQEGPKPDTSYLELRSRRL 60

Query: 290 EKLNIFIQXXXXXXXXXXXNHQGQNCCSDKEMG---FRALSSGPIGTKKESLEDE----- 135
           EK  +  +            +      S  E+G     ++ S P G K  ++E E     
Sbjct: 61  EKPPLLSE-------PNKKQNPNPKASSRVELGSVNSNSVGSVPPGEKINAVETEDVGVE 113

Query: 134 -RFGENSL*FE 105
             +GEN L FE
Sbjct: 114 ASYGENVLEFE 124


>gb|AEZ35251.1| cyclin-dependent kinase inhibitor [Persea americana]
          Length = 218

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/103 (40%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
 Frame = -2

Query: 422 MGKLMRKEKLTSET-------PSLGVRTRAKTLALQRL------PEYCYLQLRSRRLEKL 282
           MGK MRK K+TSE         SLGVRTRA+ LALQ L          YLQLRSRRLEK 
Sbjct: 1   MGKYMRKAKITSEVVVMEVSQASLGVRTRARALALQNLQNTSSATSSSYLQLRSRRLEK- 59

Query: 281 NIFIQXXXXXXXXXXXNHQG--QNCCSDKEMGFRALSSGPIGT 159
                             +G  Q C S+  +G  +++SG +G+
Sbjct: 60  ------PVAAEEEAKKPKEGCKQKCSSNSRLGSVSVNSGSVGS 96


Top