BLASTX nr result

ID: Lithospermum22_contig00041935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041935
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    75   5e-12
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    68   9e-10
ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula] g...    66   3e-09
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...    65   4e-09
ref|NP_849530.1| putative F-box/LRR-repeat protein 9 [Arabidopsi...    65   4e-09

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/47 (70%), Positives = 37/47 (78%)
 Frame = +2

Query: 188 WLELPEDITEKILRKLGQVGILNAAQYVCTTWRKICRDPTMWRVIHM 328
           WLELP D+T  IL+KLG V IL  AQYVC++WRKIC DP MWRVI M
Sbjct: 17  WLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDM 63


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = +2

Query: 188 WLELPEDITEKILRKLGQVGILNAAQYVCTTWRKICRDPTMWRVIHMWRIED 343
           W ELP D+T  IL KL  V IL++AQ+VC+ WRK+CR+P MWR I M  + D
Sbjct: 20  WQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGD 71


>ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355524124|gb|AET04578.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 307

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +2

Query: 188 WLELPEDITEKILRKLGQVGILNAAQYVCTTWRKICRDPTMWRVIHMWRIEDRFIYSSGH 367
           WLELP+D+T  IL++LG V IL  A+ VC  W  IC+DP MWR I M      F Y++  
Sbjct: 22  WLELPKDLTSNILKRLGAVEILTNARNVCPYWWNICKDPFMWREIQMGTFHLYFQYANAD 81

Query: 368 MGLVDVFI----LAVDLS 409
              +D  +     AVDLS
Sbjct: 82  APDLDYLVKLCQYAVDLS 99


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = +2

Query: 188 WLELPEDITEKILRKLGQVGILNAAQYVCTTWRKICRDPTMWRVIHMWRIEDRF 349
           WLELP ++   IL+K+G + I    QYVC++WRK+C DP MWR I M RI   F
Sbjct: 6   WLELPSEVMSMILQKVGAIEIFQNVQYVCSSWRKLCMDPLMWRTIDM-RISGNF 58


>ref|NP_849530.1| putative F-box/LRR-repeat protein 9 [Arabidopsis thaliana]
           gi|75265494|sp|Q9S9V8.1|FBL9_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein 9
           gi|5732065|gb|AAD48964.1|AF147263_6 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|332657128|gb|AEE82528.1|
           putative F-box/LRR-repeat protein 9 [Arabidopsis
           thaliana]
          Length = 246

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +2

Query: 188 WLELPEDITEKILRKLGQVGILNAAQYVCTTWRKICRDPTMWRVIHMWRIEDRFIYSSGH 367
           W ELP ++T  IL +LG + IL  AQ VC +WR++C+DP+MWR I + RI++  + S   
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDI-RIKENLVNSVEL 79

Query: 368 MGLVD-VFILAVDLSQ 412
             +++ +   AVDLSQ
Sbjct: 80  FYVIEPLCCRAVDLSQ 95


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