BLASTX nr result

ID: Lithospermum22_contig00041899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041899
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16757.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...    56   4e-06
ref|XP_002526513.1| protein binding protein, putative [Ricinus c...    55   6e-06

>emb|CBI16757.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 129 IEEKQIG-RGGAEAVLNIQPNSSISIAYHTLFGAHXXXXXXXXXXXXVPDILNQ 287
           +E+KQ G  GGAEAVLN+QPNSSISI YH  FG H            +PD+L+Q
Sbjct: 1   MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQ 54


>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
           vinifera]
          Length = 397

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 129 IEEKQIG-RGGAEAVLNIQPNSSISIAYHTLFGAHXXXXXXXXXXXXVPDILNQ 287
           +E+KQ G  GGAEAVLN+QPNSSISI YH  FG H            +PD+L+Q
Sbjct: 1   MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQ 54


>ref|XP_002526513.1| protein binding protein, putative [Ricinus communis]
           gi|223534188|gb|EEF35904.1| protein binding protein,
           putative [Ricinus communis]
          Length = 396

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +3

Query: 135 EKQIGRGGAEAVLNIQPNSSISIAYHTLFGAHXXXXXXXXXXXXVPDILNQ 287
           + ++G  GAEAVLN+QPNSS+++ YH LFG+H            +PD+L+Q
Sbjct: 3   QAEVGCSGAEAVLNLQPNSSVAVGYHPLFGSHDDLILLELDHNLLPDVLHQ 53


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