BLASTX nr result

ID: Lithospermum22_contig00041898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041898
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein...    99   4e-19
ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...    96   4e-18
emb|CBI16757.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_003522876.1| PREDICTED: sister chromatid cohesion protein...    94   1e-17
ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine
           max]
          Length = 396

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/100 (52%), Positives = 66/100 (66%)
 Frame = -3

Query: 304 LNQRVTVRGQQDEDAVLCTESKTYAVKFVGTSNSVFLMPPYVESHAQTISHDINDNSCDG 125
           LN+RV +RGQ DEDAVLCT+SKTYA+KFVGTSNSV L+PP   S         + NS + 
Sbjct: 52  LNERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANHSEYYENQLKNDSNSDEE 111

Query: 124 MVIGSVLKVATGVMELVEAAPXXXXXXXXLSQRPYSFEDE 5
            V+  VLKV +G MEL+E AP        LS++PY  E++
Sbjct: 112 KVVAPVLKVVSGNMELIETAPRLDKLKSLLSEKPYKLEED 151


>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
           vinifera]
          Length = 397

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/101 (50%), Positives = 67/101 (66%)
 Frame = -3

Query: 304 LNQRVTVRGQQDEDAVLCTESKTYAVKFVGTSNSVFLMPPYVESHAQTISHDINDNSCDG 125
           L+QRVT+RGQ +EDAVLCT+SKTY++KFVG SNSVFL+PP  +S         ++   D 
Sbjct: 52  LHQRVTLRGQPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQ 111

Query: 124 MVIGSVLKVATGVMELVEAAPXXXXXXXXLSQRPYSFEDES 2
            V+ SV+KVA G MELVE AP        L + P++ E+ S
Sbjct: 112 RVVASVIKVAPGNMELVEVAPRLDKLKLLLLENPFTSEEVS 152


>emb|CBI16757.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/99 (50%), Positives = 66/99 (66%)
 Frame = -3

Query: 304 LNQRVTVRGQQDEDAVLCTESKTYAVKFVGTSNSVFLMPPYVESHAQTISHDINDNSCDG 125
           L+QRVT+RGQ +EDAVLCT+SKTY++KFVG SNSVFL+PP  +S         ++   D 
Sbjct: 52  LHQRVTLRGQPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQ 111

Query: 124 MVIGSVLKVATGVMELVEAAPXXXXXXXXLSQRPYSFED 8
            V+ SV+KVA G MELVE AP        L + P++ E+
Sbjct: 112 RVVASVIKVAPGNMELVEVAPRLDKLKLLLLENPFTSEE 150


>ref|XP_003522876.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine
           max]
          Length = 396

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/100 (50%), Positives = 64/100 (64%)
 Frame = -3

Query: 304 LNQRVTVRGQQDEDAVLCTESKTYAVKFVGTSNSVFLMPPYVESHAQTISHDINDNSCDG 125
           LN+RV +RGQ DEDAVLCT SKTYA+KFVGTSNSV L+PP   S         +  + + 
Sbjct: 52  LNERVVLRGQPDEDAVLCTLSKTYAMKFVGTSNSVLLVPPANHSEFSENPQKNDSTNDED 111

Query: 124 MVIGSVLKVATGVMELVEAAPXXXXXXXXLSQRPYSFEDE 5
            V+  VLKV +G MEL+E AP        LS++PY  E++
Sbjct: 112 KVVVPVLKVVSGNMELIETAPRLDKLKLLLSEKPYKLEED 151


>ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|222845790|gb|EEE83337.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
 Frame = -3

Query: 304 LNQRVTVRGQQDEDAVLCTESKTYAVKFVGTSNSVFLMPPYVE----SHAQTISHDINDN 137
           L++RV +RGQ DED+VLCT+SKTYA+KFVG SNS FL+PP  +     ++Q    +IND 
Sbjct: 50  LHERVALRGQLDEDSVLCTQSKTYAIKFVGNSNSPFLIPPSGQFALCENSQDFDGEIND- 108

Query: 136 SCDGMVIGSVLKVATGVMELVEAAPXXXXXXXXLSQRPYSFED 8
                    V+KVA G MELVE AP        LS+ PYS+ED
Sbjct: 109 ------FAPVIKVAPGNMELVEVAPKLDRLKLLLSENPYSYED 145


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