BLASTX nr result

ID: Lithospermum22_contig00041871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041871
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   109   2e-22
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   109   3e-22
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   109   3e-22
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   105   3e-21
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -1

Query: 262 KKRKTNENSFLSRN-VKGGTLIICPMALLGQWKNELEAHTVPDSISIFVHYERGRRDNAK 86
           KK  T + S  S    +GGTLI+CPMALLGQWK ELE H+ P+SISIFVHY   R +N +
Sbjct: 558 KKVTTEKKSQKSTTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPE 617

Query: 85  VLADFDVVLTTYGVLQSAYKSDGENSVF 2
           VL  +DVVLTTYGVL SAYKSDGE S++
Sbjct: 618 VLLGYDVVLTTYGVLTSAYKSDGEFSIY 645


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/86 (58%), Positives = 68/86 (79%)
 Frame = -1

Query: 259 KRKTNENSFLSRNVKGGTLIICPMALLGQWKNELEAHTVPDSISIFVHYERGRRDNAKVL 80
           ++ T+ ++    NVKGGTLI+CPMALL QWK+ELE H+ P+SISIF+HY   R ++ KV+
Sbjct: 671 EKNTDSHTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVI 730

Query: 79  ADFDVVLTTYGVLQSAYKSDGENSVF 2
           ++ DVVLTTYGVL SAYK+D  +S+F
Sbjct: 731 SEHDVVLTTYGVLTSAYKNDENSSIF 756


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/86 (58%), Positives = 68/86 (79%)
 Frame = -1

Query: 259 KRKTNENSFLSRNVKGGTLIICPMALLGQWKNELEAHTVPDSISIFVHYERGRRDNAKVL 80
           ++ T+ ++    NVKGGTLI+CPMALL QWK+ELE H+ P+SISIF+HY   R ++ KV+
Sbjct: 688 EKNTDSHTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVI 747

Query: 79  ADFDVVLTTYGVLQSAYKSDGENSVF 2
           ++ DVVLTTYGVL SAYK+D  +S+F
Sbjct: 748 SEHDVVLTTYGVLTSAYKNDENSSIF 773


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = -1

Query: 265  RKKRKTNENSFLSRNVKGGTLIICPMALLGQWKNELEAHTVPDSISIFVHYERGRRDNAK 86
            ++KRK +  +      KGGTLIICPMALL QWK+ELE H+ PD++S+ V+Y   R  +AK
Sbjct: 752  KRKRKESHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAK 811

Query: 85   VLADFDVVLTTYGVLQSAYKSDGENSVF 2
             +A  DVVLTTYGVL SAYK D  NS+F
Sbjct: 812  AIASHDVVLTTYGVLTSAYKQDMANSIF 839


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 60/75 (80%)
 Frame = -1

Query: 226 RNVKGGTLIICPMALLGQWKNELEAHTVPDSISIFVHYERGRRDNAKVLADFDVVLTTYG 47
           R   GGTLI+CPMALL QWK+ELE H+ P+SISIF+HY   R ++ KV+++ DVVLTTYG
Sbjct: 651 RRSSGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYG 710

Query: 46  VLQSAYKSDGENSVF 2
           VL SAYK+D  +S+F
Sbjct: 711 VLTSAYKNDENSSIF 725


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