BLASTX nr result

ID: Lithospermum22_contig00041868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041868
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...    99   5e-19
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]    99   5e-19
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici...    95   7e-18

>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = -2

Query: 236 QKELLFPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           QKE +FPER GQPECQYYM+TG+CKFGSSCKY HPPE    K NC LSP+GLPLRP
Sbjct: 295 QKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRP 350



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/51 (58%), Positives = 37/51 (72%)
 Frame = -2

Query: 221 FPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           FPER+GQP CQ+YMKTG CKFG+SCKY HP +   +    +L+  G PLRP
Sbjct: 92  FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRP 142


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = -2

Query: 236 QKELLFPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           QKE +FPER GQPECQYYM+TG+CKFGSSCKY HPPE    K NC LSP+GLPLRP
Sbjct: 335 QKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRP 390



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/51 (58%), Positives = 37/51 (72%)
 Frame = -2

Query: 221 FPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           FPER+GQP CQ+YMKTG CKFG+SCKY HP +   +    +L+  G PLRP
Sbjct: 132 FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRP 182


>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -2

Query: 236 QKELLFPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           QKE +FPER GQPECQYYMKTG+CKF SSC+Y HPPE++ SK N  LSP+GLPLRP
Sbjct: 293 QKEHVFPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRP 348



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = -2

Query: 221 FPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           FPER+GQP CQYYM+TG CKFG+SCKY+HP +   S    SL+  G PLRP
Sbjct: 90  FPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRP 140


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -2

Query: 236 QKELLFPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           QKE LFPER GQPECQYY+KTG+CKF SSC+Y HPPE++ SK N  LSP+GLPLRP
Sbjct: 293 QKEHLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRP 348



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = -2

Query: 221 FPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           +PER GQP CQYYM+TG CKFG+SCKY HP +   S    SL+  G PLRP
Sbjct: 90  YPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYPLRP 140


>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223543980|gb|EEF45506.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 481

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 242 NIQKELLFPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           N +++  FPER GQPECQYYMKTG+CKFGSSCKY HPPE++  K N  LSP+GLPLRP
Sbjct: 290 NQKEQPSFPERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRP 347



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -2

Query: 221 FPERLGQPECQYYMKTGNCKFGSSCKYDHPPEVLQSKMNCSLSPLGLPLRP 69
           FPER+GQP CQYYM+TG CKFG+SCKY HP +   S    SL+  G PLRP
Sbjct: 90  FPERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYGYPLRP 140


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