BLASTX nr result

ID: Lithospermum22_contig00041860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041860
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323475.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002326367.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260...    61   8e-08
ref|XP_004156336.1| PREDICTED: transcription initiation factor T...    58   9e-07
ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002323475.1| predicted protein [Populus trichocarpa] gi|222868105|gb|EEF05236.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = +1

Query: 40  ENYSSFLDTFAPAIEATKGVISESPNDMEISELV-KKPALCLEFKHGKNVLREPLDLRLQ 216
           +N+ S +  FAPAIEA K        D E   L  K+PA+  +FK GK +L E LDL L 
Sbjct: 216 KNHISVMQAFAPAIEAAKEGGICDDGDFERKTLPEKRPAVIFKFKTGKKLLGESLDLSLS 275

Query: 217 S----RTASWFGRDDERDDKKR 270
                RT  W GRDDERDDKKR
Sbjct: 276 KKGGRRTGHWLGRDDERDDKKR 297


>ref|XP_002326367.1| predicted protein [Populus trichocarpa] gi|222833560|gb|EEE72037.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
 Frame = +1

Query: 40  ENYSSFLDTFAPAIEATK-GVISESPNDMEISELVKKPALCLEFKHGKNVLREPLDLRL- 213
           +N+ S ++ FAP IEA K G I +  +    S   K+ A+  +FK GK +L E LDL L 
Sbjct: 215 KNHVSVMEAFAPVIEAAKEGGICDDVDVERKSLPEKRLAVAFKFKTGKKLLGESLDLSLL 274

Query: 214 ---QSRTASWFGRDDERDDKKR 270
              + RT  W GRDDERDDKKR
Sbjct: 275 KKGEGRTGHWLGRDDERDDKKR 296


>ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260255 [Vitis vinifera]
          Length = 368

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   VLPAKRFGKEGHSENYSSFLDTFAPAIEATKGVISESPNDMEISELVKKPALCLEFKHGK 180
           VLPAK    +   +N+ S L+TFAPAIEA K    +S    +     K+ A+  + + GK
Sbjct: 257 VLPAKLLD-DLVVDNHVSVLETFAPAIEAVKNSFVDSGESEKNVVPEKRSAVHFKLRTGK 315

Query: 181 NVLREPLDLRLQSRT----ASWFGRDDERDDKKR 270
            +L E +DLRL++++     S  GRD+ERDDKKR
Sbjct: 316 KILGESVDLRLKNKSVGKVVSLIGRDEERDDKKR 349


>ref|XP_004156336.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Cucumis sativus]
          Length = 315

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
 Frame = +1

Query: 34  HSEN----YSSFLDTFAPAIEATKGV-ISESPNDMEISELVKKPALCLEFKHGKNVLREP 198
           HS+N     S  L+ FAPAIEA KG    +    ++ +  + +P +  +FK GK +L + 
Sbjct: 209 HSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQFKFKTGKKLLGDS 268

Query: 199 LDLRLQS----RTASWFGRDDERDDKKR 270
           LDL +Q     RT    GRDDERDDKKR
Sbjct: 269 LDLNIQKKGMGRTVYLVGRDDERDDKKR 296


>ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|222866906|gb|EEF04037.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = +1

Query: 40  ENYSSFLDTFAPAIEATKGVISESPNDMEISELVKKPALCLEFKHGKNVLREPLDLRLQ- 216
           +N+ S L+TFAPAIEA K    +S    +   L ++PA+  + + GKN L    DL  Q 
Sbjct: 283 DNHISVLETFAPAIEAMKSRFCDSEEGQKKVLLNQRPAVQFKIQVGKNSLAGAPDLSPQK 342

Query: 217 ---SRTASWFGRDDERDDKKR 270
               + + WFG+D E DDKKR
Sbjct: 343 IGIEKISKWFGKDSENDDKKR 363


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