BLASTX nr result

ID: Lithospermum22_contig00041826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041826
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374...    58   9e-07
ref|YP_007475169.1| cytochrome b6 (chloroplast) [Arundinaria gig...    55   5e-06
ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024...    55   5e-06
ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [S...    55   5e-06
emb|CAA32267.1| petB [Hordeum vulgare subsp. vulgare]                  55   5e-06

>ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374093729|gb|AEY84165.1|
           cytochrome b6 (chloroplast) [Vaccinium macrocarpon]
           gi|385198157|gb|AFI44075.1| cytochrome b6 [Vaccinium
           macrocarpon]
          Length = 226

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -1

Query: 262 GSSTYLNKIYDWFEECLEIQAITDDITSK*VP 167
           GS TYLNK+YDWFEE LEIQAI DDITSK VP
Sbjct: 7   GSLTYLNKVYDWFEERLEIQAIADDITSKYVP 38


>ref|YP_007475169.1| cytochrome b6 (chloroplast) [Arundinaria gigantea]
           gi|441480279|gb|AGC38191.1| cytochrome b6 (chloroplast)
           [Arundinaria gigantea]
          Length = 234

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -1

Query: 262 GSSTYLNKIYDWFEECLEIQAITDDITSK*VP 167
           G  TYLNK+YDWFEE LEIQAI DDITSK VP
Sbjct: 15  GLVTYLNKVYDWFEERLEIQAIADDITSKYVP 46


>ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024406.1| cytochrome b6
           [Saccharum hybrid cultivar SP-80-3280]
           gi|118614521|ref|YP_899437.1| cytochrome b6 [Sorghum
           bicolor] gi|902251|emb|CAA60315.1| cytochrome B6 [Zea
           mays] gi|48478701|gb|AAT44721.1| cytochrome b6
           [Saccharum hybrid cultivar SP80-3280]
           gi|118201155|gb|ABK79525.1| cytochrome b6 [Sorghum
           bicolor]
          Length = 234

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -1

Query: 262 GSSTYLNKIYDWFEECLEIQAITDDITSK*VP 167
           G  TYLNK+YDWFEE LEIQAI DDITSK VP
Sbjct: 15  GLVTYLNKVYDWFEERLEIQAIADDITSKYVP 46


>ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [Sorghum bicolor]
           gi|12437|emb|CAA29000.1| unnamed protein product [Zea
           mays] gi|241929845|gb|EES02990.1| hypothetical protein
           SORBIDRAFT_03g017580 [Sorghum bicolor]
           gi|413933808|gb|AFW68359.1| cytochrome b6 [Zea mays]
          Length = 232

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -1

Query: 262 GSSTYLNKIYDWFEECLEIQAITDDITSK*VP 167
           G  TYLNK+YDWFEE LEIQAI DDITSK VP
Sbjct: 13  GLVTYLNKVYDWFEERLEIQAIADDITSKYVP 44


>emb|CAA32267.1| petB [Hordeum vulgare subsp. vulgare]
          Length = 232

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -1

Query: 262 GSSTYLNKIYDWFEECLEIQAITDDITSK*VP 167
           G  TYLNK+YDWFEE LEIQAI DDITSK VP
Sbjct: 13  GLVTYLNKVYDWFEERLEIQAIADDITSKYVP 44


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