BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041769
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   1e-12
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    77   2e-12
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    69   8e-12
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    74   1e-11
ref|XP_002535257.1| conserved hypothetical protein [Ricinus comm...    72   2e-11

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 72.0 bits (175), Expect(2) = 1e-12
 Identities = 33/69 (47%), Positives = 46/69 (66%)
 Frame = +3

Query: 96  LNKIINPLQASFFLGRQGGDNVILVQEALHSLNKITGKSGYMAIKLDLEKAFDRIEWSCI 275
           L  +I+P Q SF   RQ  DNVI+VQE  HS+    GK G+MA+K+D EKA+DR+ W+ I
Sbjct: 536 LPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFI 595

Query: 276 RHCQKKIRL 302
           R    ++R+
Sbjct: 596 RESLMELRI 604



 Score = 25.4 bits (54), Expect(2) = 1e-12
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 2   VLRIIRNTFLNHDTIEEINATYICLIPKVDRTQ 100
           V+ ++       D  E  N T+I LIPK+D  Q
Sbjct: 474 VMHLVSEILSGRDFPEGFNDTFIVLIPKMDIPQ 506


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = +3

Query: 96  LNKIINPLQASFFLGRQGGDNVILVQEALHSLNKITGKSGYMAIKLDLEKAFDRIEWSCI 275
           ++K+I P QASF  GR   DN++++QEA+HS+ +  G+ G+M +KLDLEKA+DRI W  +
Sbjct: 90  ISKLIRPAQASFISGRLAADNIVIMQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWEFL 149

Query: 276 RHCQKKIRL 302
               + +RL
Sbjct: 150 EDTLRAVRL 158


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 68.9 bits (167), Expect(2) = 8e-12
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +3

Query: 96  LNKIINPLQASFFLGRQGGDNVILVQEALHSLNKITGKSGYMAIKLDLEKAFDRIEWSCI 275
           LN +I P Q+SF  GR   DN I++QE LH + +   K GY+A KLDLEKAFD + W  +
Sbjct: 532 LNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFL 591

Query: 276 RHC 284
             C
Sbjct: 592 NSC 594



 Score = 25.8 bits (55), Expect(2) = 8e-12
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 2   VLRIIRNTFLNHDTIEEINATYICLIPKVD 91
           V  ++R+ FL       I+ T I LIPK+D
Sbjct: 470 VFHLVRSAFLTGHFDPAISNTLIALIPKID 499


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = +3

Query: 96  LNKIINPLQASFFLGRQGGDNVILVQEALHSLNKITGKSGYMAIKLDLEKAFDRIEWSCI 275
           ++K+I P QASF  GR   DN++LVQEA+HS+ +  G+ G+M +KLDLEKA+DR+ W  +
Sbjct: 393 ISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFL 452

Query: 276 RHCQKKIRLS 305
           +   +   LS
Sbjct: 453 QETLEAAGLS 462


>ref|XP_002535257.1| conserved hypothetical protein [Ricinus communis]
           gi|223523624|gb|EEF27127.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score = 72.4 bits (176), Expect(2) = 2e-11
 Identities = 32/68 (47%), Positives = 51/68 (75%)
 Frame = +3

Query: 72  VSSQRLIGLNKIINPLQASFFLGRQGGDNVILVQEALHSLNKITGKSGYMAIKLDLEKAF 251
           +++   I ++K+I+P+Q+S   GR   +N+I+V+E LH  NK+T K+GYM IK+DLEKA+
Sbjct: 124 IANHLKIIMSKVISPMQSSIVKGRHIMNNIIIVKEILHLTNKMTSKTGYMVIKVDLEKAY 183

Query: 252 DRIEWSCI 275
           D++ WS I
Sbjct: 184 DKLNWSFI 191



 Score = 20.8 bits (42), Expect(2) = 2e-11
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 50  EINATYICLIPKVD 91
           EIN T   LIPK+D
Sbjct: 86  EINCTNTFLIPKMD 99