BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041741
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...   148   4e-34
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CBI18516.3| unnamed protein product [Vitis vinifera]              148   5e-34
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]   148   5e-34
ref|XP_002864412.1| pentatricopeptide repeat-containing protein ...   142   2e-32

>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score =  148 bits (374), Expect = 4e-34
 Identities = 65/92 (70%), Positives = 82/92 (89%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           GYVP++VTYNT+L+WYCKKGRYKAA+ELID+MG KG+E D C+YNML+ DLC+ +RSAK 
Sbjct: 198 GYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKG 257

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKI 9
           YLLLKKMRK  + PN +TYN++++GFVKEGKI
Sbjct: 258 YLLLKKMRKRMISPNEITYNSIINGFVKEGKI 289



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/93 (32%), Positives = 55/93 (59%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G  P  V+Y+ LL+  C+  +++ +  +++RM   G+     +Y  +I  LCR     ++
Sbjct: 338 GPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNES 397

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIE 6
             LL KM K  ++P+VVT++ L++GF + GKI+
Sbjct: 398 VKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIK 430



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/82 (36%), Positives = 49/82 (59%)
 Frame = -2

Query: 278  VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
            +PT+ T+ TL+H +C+      A++L D M    ++ DV +YN+LIS LC     A A  
Sbjct: 937  IPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALK 996

Query: 98   LLKKMRKISMLPNVVTYNTLLD 33
            L K++++  + PN+ TY  L+D
Sbjct: 997  LYKEIKQRGLWPNMTTYCILID 1018



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/88 (29%), Positives = 50/88 (56%)
 Frame = -2

Query: 278 VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
           +P  VTYN L+  +C  G ++ A+ +++ M   G +P+  SY+ L++ LCR  +   +  
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKS 364

Query: 98  LLKKMRKISMLPNVVTYNTLLDGFVKEG 15
           +L++MR   M+   + Y  ++DG  + G
Sbjct: 365 ILERMRMNGMIVGCIAYTAMIDGLCRNG 392



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/91 (37%), Positives = 54/91 (59%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+ P++ T N LL    K+ +  A       M  + + PDV ++N+LI+ LC   +  KA
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
             LLKKM +   +P+VVTYNT+L+ + K+G+
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGR 218



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/92 (28%), Positives = 49/92 (53%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G +   + Y  ++   C+ G    +V+L+D+M   G+ PDV ++++LI+  CR  +    
Sbjct: 373 GMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNV 432

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKI 9
             ++ KM K  + PN + Y TL+  + K G +
Sbjct: 433 KEIICKMYKAGLAPNSIIYTTLIYNYCKTGDV 464



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/91 (30%), Positives = 47/91 (51%)
 Frame = -2

Query: 275 PTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLL 96
           P  +TYN++++ + K+G+  AA  +   M    L P+  +YN LI   C      +A  +
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 95  LKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           L+ M      PN V+Y+ LL+G  +  K E+
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGLCRHAKFEL 361



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/94 (30%), Positives = 50/94 (53%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G VP +VT++ L++ +C+ G+ K   E+I +M   GL P+   Y  LI + C+T    +A
Sbjct: 408 GVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEA 467

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           + +   M +I    N    N L+    K+GK+ +
Sbjct: 468 FKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501


>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = -2

Query: 284  GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
            G+VPT+VTYNTLL+WYCKKGRYKAA+ELID M  KG+E DVC+YN+ I +LC  HRSAKA
Sbjct: 1014 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 1073

Query: 104  YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
            YLLLKKMRK  + PN VTYNTL++GFVKEGKI +
Sbjct: 1074 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 1107



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 278  VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
            +PT+ T+ TL+H +C+  +   A++L   M   GL+ DV +YN+LI  +C    SA A+ 
Sbjct: 1752 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1811

Query: 98   LLKKMRKISMLPNVVTYNTLLD 33
            L ++MR   + PN+ TY  L+D
Sbjct: 1812 LYEEMRHRDLCPNITTYAVLVD 1833



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = -2

Query: 284  GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
            G+ P++ T N +L    K  R +    L   M  KG+ P+V ++N+LI+ LC      KA
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 104  YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
              LLK+M +   +P +VTYNTLL+ + K+G+
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/91 (36%), Positives = 47/91 (51%)
 Frame = -2

Query: 275  PTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLL 96
            P  VTYNTL++ + K+G+   A ++ + M    L P+  +YN LI   C      +A  L
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 1146

Query: 95   LKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
            L  M    +  N VTY TLL+G  K  K E+
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 1177



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = -2

Query: 275  PTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLL 96
            P  VTYN L+  +C  G ++ A+ L+D M   GL  +  +Y  L++ LC+  +   A  L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 95   LKKMRKISMLPNVVTYNTLLDGFVKEGKIE 6
            L++MR   M+   + Y  L+DG  K G ++
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLD 1211



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/87 (34%), Positives = 51/87 (58%)
 Frame = -2

Query: 266  VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
            VTY TLL+  CK  +++ A  L++RM    +     +Y +LI  LC+     +A  L+  
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219

Query: 86   MRKISMLPNVVTYNTLLDGFVKEGKIE 6
            M K  + P+V+TY++L++GF + G I+
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIK 1246



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 266  VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLL-K 90
            V YNTLL   CK G    AV L D+M    + PD  +Y+ L++ LCR  ++  A  L   
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 89   KMRKISMLPNVVTYNTLLDGFVKEG 15
             M + ++ PN V Y  L+DG  K G
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAG 1489



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/86 (30%), Positives = 45/86 (52%)
 Frame = -2

Query: 266  VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
            + Y  L+   CK G    AV+L+  M   G+ PDV +Y+ LI+  CR      A  ++ +
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254

Query: 86   MRKISMLPNVVTYNTLLDGFVKEGKI 9
            M +  ++ N + Y+TL+  F + G +
Sbjct: 1255 MYRSGLVLNKIIYSTLIYNFCQHGNV 1280



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = -2

Query: 284  GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
            G  P+  TY +LL   CK G    A + ++R+ +     D   YN L+++ C++    +A
Sbjct: 1364 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 1423

Query: 104  YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
              L  KM + ++LP+  TY++LL G  ++GK
Sbjct: 1424 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454


>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+VPT+VTYNTLL+WYCKKGRYKAA+ELID M  KG+E DVC+YN+ I +LC  HRSAKA
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           YLLLKKMRK  + PN VTYNTL++GFVKEGKI +
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 278  VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
            +PT+ T+ TL+H +C+  +   A++L   M   GL+ DV +YN+LI  +C    SA A+ 
Sbjct: 826  LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 885

Query: 98   LLKKMRKISMLPNVVTYNTLLD 33
            L ++MR   + PN+ TY  L+D
Sbjct: 886  LYEEMRHRDLCPNITTYAVLVD 907



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+ P++ T N +L    K  R +    L   M  KG+ P+V ++N+LI+ LC      KA
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
             LLK+M +   +P +VTYNTLL+ + K+G+
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLL-K 90
           V YNTLL   CK G    AV L D+M    + PD  +Y+ L++ LCR  ++  A  L   
Sbjct: 537 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 596

Query: 89  KMRKISMLPNVVTYNTLLDGFVKEG 15
            M + ++ PN V Y  L+DG  K G
Sbjct: 597 AMGRGTLFPNHVMYTCLVDGLSKAG 621



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G  P+  TY +LL   CK G    A + ++R+ +     D   YN L+++ C++    +A
Sbjct: 496 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 555

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
             L  KM + ++LP+  TY++LL G  ++GK
Sbjct: 556 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 586


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+VPT+VTYNTLL+WYCKKGRYKAA+ELID M  KG+E DVC+YN+ I +LC  HRSAKA
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           YLLLKKMRK  + PN VTYNTL++GFVKEGKI +
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -2

Query: 278  VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
            +PT+ T+ TL+H +C+  +   A++L   M   GL+ DV +YN+LI  +C    SA A+ 
Sbjct: 1001 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1060

Query: 98   LLKKMRKISMLPNVVTYNTLLD 33
            L ++MR   + PN+ TY  L+D
Sbjct: 1061 LYEEMRHRDLCPNITTYAVLVD 1082



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+ P++ T N +L    K  R +    L   M  KG+ P+V ++N+LI+ LC      KA
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
             LLK+M +   +P +VTYNTLL+ + K+G+
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/91 (36%), Positives = 47/91 (51%)
 Frame = -2

Query: 275 PTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLL 96
           P  VTYNTL++ + K+G+   A ++ + M    L P+  +YN LI   C      +A  L
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 95  LKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           L  M    +  N VTY TLL+G  K  K E+
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 426



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = -2

Query: 275 PTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLL 96
           P  VTYN L+  +C  G ++ A+ L+D M   GL  +  +Y  L++ LC+  +   A  L
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 430

Query: 95  LKKMRKISMLPNVVTYNTLLDGFVKEGKIE 6
           L++MR   M+   + Y  L+DG  K G ++
Sbjct: 431 LERMRVNDMVVGHIAYTVLIDGLCKNGMLD 460



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/87 (34%), Positives = 51/87 (58%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
           VTY TLL+  CK  +++ A  L++RM    +     +Y +LI  LC+     +A  L+  
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468

Query: 86  MRKISMLPNVVTYNTLLDGFVKEGKIE 6
           M K  + P+V+TY++L++GF + G I+
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIK 495



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLL-K 90
           V YNTLL   CK G    AV L D+M    + PD  +Y+ L++ LCR  ++  A  L   
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 89  KMRKISMLPNVVTYNTLLDGFVKEG 15
            M + ++ PN V Y  L+DG  K G
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAG 738



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/86 (30%), Positives = 45/86 (52%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
           + Y  L+   CK G    AV+L+  M   G+ PDV +Y+ LI+  CR      A  ++ +
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503

Query: 86  MRKISMLPNVVTYNTLLDGFVKEGKI 9
           M +  ++ N + Y+TL+  F + G +
Sbjct: 504 MYRSGLVLNKIIYSTLIYNFCQHGNV 529



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G  P+  TY +LL   CK G    A + ++R+ +     D   YN L+++ C++    +A
Sbjct: 613 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 672

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
             L  KM + ++LP+  TY++LL G  ++GK
Sbjct: 673 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703


>ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310247|gb|EFH40671.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1245

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           GY PT+VTYNT+LHWYCKKGR+KAA+EL+D M  KG+  DVC+YNMLI DLCR++RSAK 
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKG 282

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
           YLLL+ MRK  + PN VTYNTLL+GF  EGK+ I
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLI 316



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = -2

Query: 278  VPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYL 99
            VPT+ ++ TL+H +CK G    A+EL   M + GL+ D+ SYN+LI+ LC     A A+ 
Sbjct: 961  VPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFE 1020

Query: 98   LLKKMRKISMLPNVVTYNTLLDGFVKEG 15
            L ++M++   L NV TY  L+ G + +G
Sbjct: 1021 LFEEMKRDGFLANVTTYKALVGGILSQG 1048



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 53/91 (58%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G  P  + Y+TL++  C+ G  K  + + + M  +G  PD  ++N+L++ LC+  + A+A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEA 527

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGK 12
              ++ M    +LPN V+++ L++G+   G+
Sbjct: 528 EEFMRCMTSDGILPNAVSFDCLINGYGSSGE 558



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/93 (31%), Positives = 50/93 (53%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+ P++ T N +L    K     +    +  M  + + PDV ++N+LI+ LC      K+
Sbjct: 153 GFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKS 212

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIE 6
             L++KM K    P +VTYNT+L  + K+G+ +
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/77 (29%), Positives = 45/77 (58%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
           +TY  ++   CK G    AV +++ M   G++PD+ +Y+ LI+  CR  R   A  ++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463

Query: 86  MRKISMLPNVVTYNTLL 36
           + ++ + PN + Y+TL+
Sbjct: 464 IYRVGLSPNGIIYSTLI 480



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/92 (31%), Positives = 48/92 (52%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G  P +VTY+ L++ +C+ GR K A E++ R+   GL P+   Y+ LI + CR     + 
Sbjct: 433 GIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKET 492

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKI 9
             + + M      P+  T+N L+    K GK+
Sbjct: 493 IRIYEAMILEGNTPDHFTFNVLVTSLCKAGKV 524



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%)
 Frame = -2

Query: 284 GYVPTLVTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKA 105
           G+ PT  TY +LL   CK G   AA + +  + +     D    N LI+ +C++    KA
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKA 632

Query: 104 YLLLKKMRKISMLPNVVTYNTLLDGFVKEGKIEI 3
             L  +M + S+LP+  TY +L+ G  ++GK  I
Sbjct: 633 VSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVI 666



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = -2

Query: 266 VTYNTLLHWYCKKGRYKAAVELIDRMGHKGLEPDVCSYNMLISDLCRTHRSAKAYLLLKK 87
           V  NTL+   CK G    AV L   M  + + PD  +Y  LIS LCR  ++  A L  K+
Sbjct: 614 VMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKE 673

Query: 86  MR-KISMLPNVVTYNTLLDGFVKEGK 12
              + +++PN V Y   +DG  K G+
Sbjct: 674 AEARGNLVPNKVMYTCFVDGMFKAGQ 699