BLASTX nr result

ID: Lithospermum22_contig00041726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041726
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [T...    79   3e-13
gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [...    79   3e-13
sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding pro...    79   3e-13
pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomat...    79   3e-13
emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vul...    79   3e-13

>gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
          Length = 266

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 189 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 82
           QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
Sbjct: 231 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266


>gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [Solanum
           lycopersicum] gi|170426|gb|AAA34157.1| chlorophyll
           a/b-binding protein Cab-3B, partial [Solanum
           lycopersicum]
          Length = 116

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 189 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 82
           QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
Sbjct: 81  QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 116


>sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding protein 3A, chloroplastic;
           AltName: Full=LHCII type I CAB-3A; Short=LHCP; Flags:
           Precursor
          Length = 267

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 189 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 82
           QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
Sbjct: 232 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267


>pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomato  (fragments)
           gi|224930|prf||1204205E protein 3A,chlorophyll binding
          Length = 167

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 189 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 82
           QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
Sbjct: 132 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167


>emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 189 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 82
           QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
Sbjct: 231 QAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266


Top