BLASTX nr result
ID: Lithospermum22_contig00041603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00041603
(355 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 151 5e-35
emb|CBI31710.3| unnamed protein product [Vitis vinifera] 151 5e-35
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 149 3e-34
ref|XP_003599019.1| Pentatricopeptide repeat-containing protein ... 145 3e-33
ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|2... 142 2e-32
>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 151 bits (382), Expect = 5e-35
Identities = 69/119 (57%), Positives = 98/119 (82%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I++F +M++E P+ VT +S+LPA +YL ++GMA HA + GF S+T+VGNSLID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQEN-LEIDSV 1
MYAKCG++DYSE +F+EM +KDTVSWN++L+ Y++HGHGDRA+ LFSLMQE+ ++IDSV
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735
Score = 92.0 bits (227), Expect = 4e-17
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I F ++++ PD T++ ++PA + L DL QG H K GF+S V N+LID
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALID 574
Query: 174 MYAKCGRIDYSEYVFDEMR-NKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEIDSV 1
MYAKCG + +E++F++ KD V+WN I+AAY +GH A+ F M+ EN +SV
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Score = 82.8 bits (203), Expect = 3e-14
Identities = 40/115 (34%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = -2
Query: 342 FQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAK 163
F+ M++ G +P V+++++ P + L++++ + H Y F++ F S+ V N LID+Y+K
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSK 275
Query: 162 CGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEIDSV 1
CG +D + VFD+M ++D VSW +++A Y+ +G L+LF M+ N+ I+ V
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Score = 75.5 bits (184), Expect = 4e-12
Identities = 37/106 (34%), Positives = 62/106 (58%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+++ FQ M+ + +P+ VT++SILPA + L+ LK G + H + K S G +L+
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLF 37
MYAKCG + F+ M ++D V+WNS++ Y+ G A+ +F
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = -2
Query: 342 FQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAK 163
F +MK+ + + V+ +S A + DL++G H A +Q S +V L+ MYAK
Sbjct: 317 FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAK 376
Query: 162 CGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
CG + ++ +F ++ +D V+W++I+AA G+ + AL LF MQ
Sbjct: 377 CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/100 (31%), Positives = 54/100 (54%)
Frame = -2
Query: 324 EGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAKCGRIDY 145
+G +PD T +L A + +L++G+ H ++G + +G L+DMY+K G +
Sbjct: 123 KGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182
Query: 144 SEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
+ VFD+M +D V+WN+++A S A+ F MQ
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQ 222
>emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 151 bits (382), Expect = 5e-35
Identities = 69/119 (57%), Positives = 98/119 (82%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I++F +M++E P+ VT +S+LPA +YL ++GMA HA + GF S+T+VGNSLID
Sbjct: 261 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 320
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQEN-LEIDSV 1
MYAKCG++DYSE +F+EM +KDTVSWN++L+ Y++HGHGDRA+ LFSLMQE+ ++IDSV
Sbjct: 321 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 379
>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 149 bits (375), Expect = 3e-34
Identities = 68/119 (57%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I++F +M++E P+ VT +S+LPA +YL ++GMA HA + GF S+T+VGNSLID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQEN-LEIDSV 1
MYAKCG++ YSE +F+EM +KDTVSWN++L+ Y++HGHGDRA+ LFSLMQE+ ++IDSV
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735
Score = 92.0 bits (227), Expect = 4e-17
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I F ++++ PD T++ ++PA + L DL QG H K GF+S V N+LID
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALID 574
Query: 174 MYAKCGRIDYSEYVFDEMR-NKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEIDSV 1
MYAKCG + +E++F++ KD V+WN I+AAY +GH A+ F M+ EN +SV
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Score = 82.8 bits (203), Expect = 3e-14
Identities = 40/115 (34%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = -2
Query: 342 FQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAK 163
F+ M++ G +P V+++++ P + L++++ + H Y F++ F S+ V N LID+Y+K
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSK 275
Query: 162 CGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEIDSV 1
CG +D + VFD+M ++D VSW +++A Y+ +G L+LF M+ N+ I+ V
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Score = 75.5 bits (184), Expect = 4e-12
Identities = 37/106 (34%), Positives = 62/106 (58%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+++ FQ M+ + +P+ VT++SILPA + L+ LK G + H + K S G +L+
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLF 37
MYAKCG + F+ M ++D V+WNS++ Y+ G A+ +F
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = -2
Query: 342 FQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAK 163
F +MK+ + + V+ +S A + DL++G H A +Q S +V L+ MYAK
Sbjct: 317 FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAK 376
Query: 162 CGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
CG + ++ +F ++ +D V+W++I+AA G+ + AL LF MQ
Sbjct: 377 CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/100 (31%), Positives = 54/100 (54%)
Frame = -2
Query: 324 EGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAKCGRIDY 145
+G +PD T +L A + +L++G+ H ++G + +G L+DMY+K G +
Sbjct: 123 KGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182
Query: 144 SEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
+ VFD+M +D V+WN+++A S A+ F MQ
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQ 222
>ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 944
Score = 145 bits (366), Expect = 3e-33
Identities = 68/119 (57%), Positives = 95/119 (79%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+I+ F+RMK+E +P+LVT ++ILPAVSYL+ L++ MA H + GF S T++GNSLID
Sbjct: 587 AISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLID 646
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQE-NLEIDSV 1
MYAKCG++ YSE F EM NKDT+SWN++L+AY++HG G+ A+ LFS+MQE N+ +DSV
Sbjct: 647 MYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSV 705
Score = 77.8 bits (190), Expect = 9e-13
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
++ F RM++EG + D V+I+++ PAVS L D+ + H Y ++ +V NSLID
Sbjct: 184 ALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLID 241
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQE-NLEIDSV 1
MY KCG + ++ VFD M +D VSW +++A Y +G LQL M+ N++++ V
Sbjct: 242 MYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKV 300
Score = 70.5 bits (171), Expect = 1e-10
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
++ F R+++ G PD T++ + A + + DL G H K GF+S V +L+D
Sbjct: 485 ALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMD 544
Query: 174 MYAKCGRIDYSEYVFDEMRN-KDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
MYAKCG + E +F ++ KD VSWN ++A Y +G+ + A+ F M+
Sbjct: 545 MYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMK 595
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = -2
Query: 321 GHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAKCGRIDYS 142
G +PD T +L A + D +G+ + G + +G SLIDM+ K G +D +
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 141 EYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEIDSV 1
VFD+M KD V WN++++ S + AL++F MQ E E+D V
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKV 201
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = -2
Query: 303 VTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDMYAKCGRIDYSEYVFDE 124
V +++ L V+ + DL++G + YA + G S +V ++ MYAKCG + + +F
Sbjct: 300 VAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLS 359
Query: 123 MRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLEID 7
+ +D V+W++ L+A G+ L +F +MQ E L+ D
Sbjct: 360 LEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPD 399
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/109 (26%), Positives = 60/109 (55%)
Frame = -2
Query: 351 IAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLIDM 172
++ FQ M+ EG +PD + ++ + ++++ G H YA K +S + +L+ M
Sbjct: 385 LSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSM 444
Query: 171 YAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
Y + Y+ +F+ M+ KD V WN+++ ++ +G AL++F+ +Q
Sbjct: 445 YIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQ 493
>ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|222850976|gb|EEE88523.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 142 bits (359), Expect = 2e-32
Identities = 66/118 (55%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+ +AF +MK+E QP++VTI+++LPAV++L+ L+ GM HAY + GFQS T VGN LID
Sbjct: 276 AFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLID 335
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQEN-LEIDS 4
MYAKCG +D+SE +F EM+NKDTVSWN +LA Y++HG G A++LFS MQ++ + +DS
Sbjct: 336 MYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDS 393
Score = 80.5 bits (197), Expect = 1e-13
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
++ F ++++ P+ T++ +LPA + L DL QG H K GF+S V +LID
Sbjct: 174 ALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALID 233
Query: 174 MYAKCGRIDYSEYVFDEMR-NKDTVSWNSILAAYSIHGHGDRALQLFSLMQ-ENLE 13
MYAKCG + +E++F KD VSWN ++A Y GH A F M+ EN++
Sbjct: 234 MYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQ 289
Score = 72.4 bits (176), Expect = 4e-11
Identities = 38/110 (34%), Positives = 63/110 (57%)
Frame = -2
Query: 354 SIAAFQRMKIEGHQPDLVTIISILPAVSYLTDLKQGMATHAYAFKQGFQSSTIVGNSLID 175
+++ F+ M+ EG Q + V ++S LPA + ++ LK G + H A K VG +L+
Sbjct: 73 ALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVS 132
Query: 174 MYAKCGRIDYSEYVFDEMRNKDTVSWNSILAAYSIHGHGDRALQLFSLMQ 25
MYAKCG + +F+ M KD V+WN+++ Y+ G AL++F +Q
Sbjct: 133 MYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQ 182
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = -2
Query: 258 LKQGMATHAYAFKQGFQSSTIVGNSLIDMYAKCGRIDYSEYVFDEMRNKDTVSWNSILAA 79
L +G H +A +QG S V ++ MYA+CG +D ++ +F E++ +D V+W++I+AA
Sbjct: 4 LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63
Query: 78 YSIHGHGDRALQLFSLMQ-ENLEIDSV 1
+ G+ AL LF MQ E L+ + V
Sbjct: 64 FVQSGYPQEALSLFRSMQNEGLQANKV 90