BLASTX nr result

ID: Lithospermum22_contig00041545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041545
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA52786.1| TPA: hypothetical protein ZEAMMB73_632926 [Zea m...    60   2e-07
tpg|DAA52785.1| TPA: hypothetical protein ZEAMMB73_632926 [Zea m...    60   2e-07
ref|XP_002298002.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002513623.1| ATP binding protein, putative [Ricinus commu...    57   1e-06
ref|XP_002886363.1| AAA-type ATPase family protein [Arabidopsis ...    57   2e-06

>tpg|DAA52786.1| TPA: hypothetical protein ZEAMMB73_632926 [Zea mays]
          Length = 242

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -3

Query: 259 GGNDKGSTFKRSISEATFGRMSGFFDSFSGIPPKEENRGTLRRQSS--EVEFGEKGSSFN 86
           GG +K  TFKRSISE T  R+SG F S S +P KE+ +GT+RRQSS  +V+     S+ N
Sbjct: 153 GGTEK--TFKRSISETTLERVSGLFGSLSILPQKEQPKGTIRRQSSMTDVKLRSSESTSN 210

Query: 85  SSTLRRN 65
              LRRN
Sbjct: 211 LPKLRRN 217


>tpg|DAA52785.1| TPA: hypothetical protein ZEAMMB73_632926 [Zea mays]
          Length = 841

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -3

Query: 259 GGNDKGSTFKRSISEATFGRMSGFFDSFSGIPPKEENRGTLRRQSS--EVEFGEKGSSFN 86
           GG +K  TFKRSISE T  R+SG F S S +P KE+ +GT+RRQSS  +V+     S+ N
Sbjct: 153 GGTEK--TFKRSISETTLERVSGLFGSLSILPQKEQPKGTIRRQSSMTDVKLRSSESTSN 210

Query: 85  SSTLRRN 65
              LRRN
Sbjct: 211 LPKLRRN 217


>ref|XP_002298002.1| predicted protein [Populus trichocarpa] gi|222845260|gb|EEE82807.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -3

Query: 256 GNDKGSTFKRSISEATFGRMSGFFDSFSGIPPKEENRGTLRRQSSEVEFGEKG--SSFNS 83
           G +K S FKRS SE T  R+SGF  SFS +P KEE   +L RQSS V+   +G  SS+N 
Sbjct: 156 GANKESLFKRSNSETTLERLSGFLGSFSILPQKEEPMRSLYRQSSGVDIPSRGLDSSYNP 215

Query: 82  STLRRNT 62
             LRRN+
Sbjct: 216 RKLRRNS 222


>ref|XP_002513623.1| ATP binding protein, putative [Ricinus communis]
           gi|223547531|gb|EEF49026.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 835

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -3

Query: 259 GGNDKGSTFKRSISEATFGRMSGFFDSFSGIPPKEENRGTLRRQSSEVEFGEKG-SSFNS 83
           G   K S+FKRSISE TF RMS    SFS +P +EE RGTL RQ+S ++   +    FN+
Sbjct: 149 GCTKKESSFKRSISEVTFERMSSLLGSFSILPSREEIRGTLHRQNSNLDIKSRAMEGFNN 208

Query: 82  S-TLRRN 65
              LRRN
Sbjct: 209 HIKLRRN 215


>ref|XP_002886363.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332204|gb|EFH62622.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 827

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
 Frame = -3

Query: 256 GNDKGSTFKRSISEATFGRMSGFFDSFSGIPPKEENR--GTLRRQSSEVEFGEKG--SSF 89
           GN + S+FKRS SE+   ++SG F SFS +P +EE++  GTLRRQSS V+        S 
Sbjct: 147 GNTESSSFKRSPSESALEKLSGLFSSFSILPQREESKAGGTLRRQSSGVDIKSSSMEGSS 206

Query: 88  NSSTLRRNT 62
           N   LRRN+
Sbjct: 207 NPPKLRRNS 215


Top