BLASTX nr result

ID: Lithospermum22_contig00041537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041537
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883915.1| hypothetical protein ARALYDRAFT_899792 [Arab...    59   5e-07
ref|XP_002893656.1| hypothetical protein ARALYDRAFT_890666 [Arab...    57   2e-06
ref|XP_002876845.1| hypothetical protein ARALYDRAFT_904550 [Arab...    56   3e-06
ref|XP_002878539.1| F-box family protein [Arabidopsis lyrata sub...    55   5e-06
ref|XP_002876848.1| hypothetical protein ARALYDRAFT_904554 [Arab...    55   8e-06

>ref|XP_002883915.1| hypothetical protein ARALYDRAFT_899792 [Arabidopsis lyrata subsp.
           lyrata] gi|297329755|gb|EFH60174.1| hypothetical protein
           ARALYDRAFT_899792 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
 Frame = +2

Query: 59  SRFVLCNIATHQLLEFPN--ISEIAFYYLGFEPVKEVYKVLRFLLSGYRPAPGGFHICTG 232
           +R V+CN  T +    PN      A+ + GF+P  + YKVL  +   Y   PG       
Sbjct: 66  ARPVICNPITGRYAILPNRYTYRKAYSFFGFDPNDKQYKVLSMV---YPSGPGDS----- 117

Query: 233 IEICTLGGGGVDWRSLDLVPCLDDIDLLKPMENTCINGILYLLGHHNFHYYDY-LVALDL 409
            +I T G G + WR +      D  D+    E  CING+LY LG  N    DY +V  D+
Sbjct: 118 -KILTFGDGDLTWRKIKCPLRYDRHDIKS--EGICINGVLYYLGSPNDEISDYVIVCFDV 174

Query: 410 STETFFFI 433
            +E F FI
Sbjct: 175 RSEKFTFI 182


>ref|XP_002893656.1| hypothetical protein ARALYDRAFT_890666 [Arabidopsis lyrata subsp.
           lyrata] gi|297339498|gb|EFH69915.1| hypothetical protein
           ARALYDRAFT_890666 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
 Frame = +2

Query: 68  VLCNIATHQLLEFPNISE--IAFYYLGFEPVKEVYKVLRFLLSGYRPAPGGFHICTGIEI 241
           V+CN  T Q +  P + +  +++ YLGF+P+ + +KVL    SGY       H      I
Sbjct: 352 VICNPTTGQYVILPELRKHFMSYSYLGFDPIDKEFKVLLMNTSGYIAYNDTDH-----HI 406

Query: 242 CTLGGGGVDWRSLDLVPCLDDIDLLKPMENTCINGILYLLGHHNFHYYDYLVALDLSTET 421
            TLG G + WR    + C  + + L   E  CING+LY   H        +V  D+ +E 
Sbjct: 407 LTLGTGKMRWRK---IQCPFNHEPL--WERICINGVLYYKAHQFDGRSYVIVCFDVRSEK 461

Query: 422 FFFI 433
           F FI
Sbjct: 462 FKFI 465


>ref|XP_002876845.1| hypothetical protein ARALYDRAFT_904550 [Arabidopsis lyrata subsp.
           lyrata] gi|297322683|gb|EFH53104.1| hypothetical protein
           ARALYDRAFT_904550 [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2   YD-EYYATYMVKGLFGLYS---YSRFVLCNIATHQLLEFPN--ISEIAFYYLGFEPVKEV 163
           YD  Y++     GL  +Y      R V+CN  T +    P+      A+ + GF+P+ + 
Sbjct: 113 YDPRYFSIGYASGLIYIYGCRYQGRPVICNPNTGRYAILPDRYTYRKAYSFFGFDPIDKH 172

Query: 164 YKVLRFLLSGYRPAPGGFHICTGIEICTLGGGGVDWRSLDLVPCLDDIDLLKPMENTCIN 343
           YKVL      Y   PG        +I TLG G + WR + + P   +I+     +  CIN
Sbjct: 173 YKVLSM---RYSCGPG------HNKILTLGDGDLTWRKIKISPERPEIE----SDGICIN 219

Query: 344 GILYLLGHHNFHYYDY-LVALDLSTETFFFI 433
           G+LY L       ++Y +V  D+ +ETF +I
Sbjct: 220 GVLYFLAVGVELKFEYVIVCFDVRSETFTYI 250


>ref|XP_002878539.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324378|gb|EFH54798.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
 Frame = +2

Query: 2   YD-EYYATYMVKGLFGLYS---YSRFVLCNIATHQLLEFPN--ISEIAFYYLGFEPVKEV 163
           YD +Y++     GL  LY     +R V+CN  T +    P+      A+ + GF+P+ + 
Sbjct: 123 YDLKYFSIGYASGLIYLYGNRGQARPVICNPITGRYAILPDRYTYRKAYSFFGFDPIDKQ 182

Query: 164 YKVLRFLLSGYRPAPGGFHICTGIEICTLGGGGV-DWRSLDLVPCLDDIDLLKPMENTCI 340
           YKVL  +   YRP+  G       +I T G G +  WR ++   CL   D+    E  CI
Sbjct: 183 YKVLSMV---YRPSGPG-----DSKILTFGAGDMMTWRKIN---CLLRHDVKS--EGVCI 229

Query: 341 NGILYLL------GHHNFHY---YDY-LVALDLSTETFFFI 433
           NG+LY L      GH N  +    DY +V  D+ +ETF FI
Sbjct: 230 NGVLYYLGDTSDWGHVNDGHDVTSDYVIVCFDVRSETFTFI 270


>ref|XP_002876848.1| hypothetical protein ARALYDRAFT_904554 [Arabidopsis lyrata subsp.
           lyrata] gi|297322686|gb|EFH53107.1| hypothetical protein
           ARALYDRAFT_904554 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
 Frame = +2

Query: 8   EYYATYMVKGLFGLYS---YSRFVLCNIATHQLLEFPN--ISEIAFYYLGFEPVKEVYKV 172
           +Y++     GL  +Y     +R V+CN  T +    PN      A+ + GF+P+ + YK 
Sbjct: 40  KYFSIGYASGLIYIYGNRYQARPVICNPNTGRYAILPNRYTYRKAYSFFGFDPIGKQYKA 99

Query: 173 LRFLLSGYRPAPGGFHICTGIEICTLGGGGVDWRSLDLVPCLDDIDLLKPMENTCINGIL 352
           L  +   Y   PG        +I TLG G  +WR +       +I      +  CING+L
Sbjct: 100 LSII---YPTGPGRN------KILTLGDGDFEWRKIKFPLGRPEIK----SDGICINGVL 146

Query: 353 YLLGHHNFHYYDY-LVALDLSTETFFFI 433
           Y L       ++Y +V  D+  ETF +I
Sbjct: 147 YFLAESYQGSFEYVIVCFDVRYETFTYI 174


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